Gm15175 Pseudogene Detail

Summary

• Symbol
  Gm15175
• Name
  predicted gene 15175

• Feature Type
  pseudogene
• IDs
  MGI:3705776
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:156387347-156387478 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 72.60 cM

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705776	pseudogene	ChrX:156387347-156387478 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014960	pseudogene	ChrX:155503068-155503199 (+)
A/J	MGP_AJ_G0014951	pseudogene	ChrX:154820369-154820500 (+)
AKR/J	MGP_AKRJ_G0014892	pseudogene	ChrX:159686317-159686448 (+)
BALB/cJ	MGP_BALBcJ_G0014905	pseudogene	ChrX:152874808-152874939 (+)
C3H/HeJ	MGP_C3HHeJ_G0014743	pseudogene	ChrX:155857889-155858020 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015391	pseudogene	ChrX:160088634-160088765 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014349	pseudogene	ChrX:134951876-134952007 (+)
CBA/J	MGP_CBAJ_G0014729	pseudogene	ChrX:164674007-164674138 (+)
DBA/2J	MGP_DBA2J_G0014812	pseudogene	ChrX:153789221-153789352 (+)
FVB/NJ	MGP_FVBNJ_G0014795	pseudogene	ChrX:152880640-152880771 (+)
LP/J	MGP_LPJ_G0014913	pseudogene	ChrX:156667923-156668054 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014839	pseudogene	ChrX:173238812-173238943 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015376	pseudogene	ChrX:155054311-155054442 (+)
PWK/PhJ	MGP_PWKPhJ_G0014142	pseudogene	ChrX:131910121-131910252 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013932	pseudogene	ChrX:135433450-135433581 (+)
WSB/EiJ	MGP_WSBEiJ_G0014429	pseudogene	ChrX:153047012-153047143 (+)

Homology

• Gene Tree
  Gm15175
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000083636 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083636	Ensembl Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	ENSMUST00000117629	Ensembl | MGI Sequence Detail	132	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;