Gm15209 Pseudogene Detail

Summary

• Symbol
  Gm15209
• Name
  predicted gene 15209

• Feature Type
  pseudogene
• IDs
  MGI:3705716
  NCBI Gene: 100041607
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:161677751-161678150 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 75.09 cM

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705716	pseudogene	ChrX:161677692-161678150 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014992	pseudogene	ChrX:160922879-160923278 (-)
A/J	MGP_AJ_G0014982	pseudogene	ChrX:160130253-160130652 (-)
AKR/J	MGP_AKRJ_G0014922	pseudogene	ChrX:165249126-165249525 (-)
BALB/cJ	MGP_BALBcJ_G0014936	pseudogene	ChrX:158135659-158136058 (-)
C3H/HeJ	MGP_C3HHeJ_G0014775	pseudogene	ChrX:161286130-161286529 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015422	pseudogene	ChrX:165661818-165662217 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013041	pseudogene	ChrX:151214333-151214732 (-)
CAST/EiJ	MGP_CASTEiJ_G0014378	pseudogene	ChrX:140269207-140269606 (-)
CBA/J	MGP_CBAJ_G0014759	pseudogene	ChrX:170419800-170420199 (-)
DBA/2J	MGP_DBA2J_G0014843	pseudogene	ChrX:159036975-159037374 (-)
FVB/NJ	MGP_FVBNJ_G0014825	pseudogene	ChrX:158171848-158172247 (-)
LP/J	MGP_LPJ_G0014944	pseudogene	ChrX:162100285-162100684 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014871	pseudogene	ChrX:179110156-179110555 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015406	pseudogene	ChrX:160427143-160427542 (-)
PWK/PhJ	MGP_PWKPhJ_G0014170	pseudogene	ChrX:137077895-137078306 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013956	pseudogene	ChrX:140736741-140737140 (-)
WSB/EiJ	MGP_WSBEiJ_G0014457	pseudogene	ChrX:158293897-158294296 (+)

Homology

• Gene Tree
  Gm15209
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000081917 (Evidence)
• NCBI Gene
  100041607

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081917	Ensembl Gene Model | MGI Sequence Detail	400	C57BL/6J
transcript	ENSMUST00000117703	Ensembl | MGI Sequence Detail	400	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;