Gm15289 Pseudogene Detail

Summary

• Symbol
  Gm15289
• Name
  predicted gene 15289

• Feature Type
  pseudogene
• IDs
  MGI:3705710
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:111498210-111498453 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 63.18 cM

Strain
Comparison

• SNPs within 2kb
  14 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705710	pseudogene	Chr13:111498210-111498453 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011064	pseudogene	Chr13:113847804-113848047 (+)
A/J	MGP_AJ_G0011062	pseudogene	Chr13:109320346-109320589 (+)
AKR/J	MGP_AKRJ_G0011019	pseudogene	Chr13:112619556-112619799 (+)
BALB/cJ	MGP_BALBcJ_G0011038	pseudogene	Chr13:110027473-110027716 (+)
C3H/HeJ	MGP_C3HHeJ_G0010936	pseudogene	Chr13:112403424-112403667 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011317	pseudogene	Chr13:117223350-117223593 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009910	pseudogene	Chr13:104642540-104642781 (+)
CAST/EiJ	MGP_CASTEiJ_G0010757	pseudogene	Chr13:112000193-112000433 (+)
CBA/J	MGP_CBAJ_G0010909	pseudogene	Chr13:121739021-121739264 (+)
DBA/2J	MGP_DBA2J_G0010954	pseudogene	Chr13:109043270-109043513 (+)
FVB/NJ	MGP_FVBNJ_G0010966	pseudogene	Chr13:107725689-107725932 (+)
LP/J	MGP_LPJ_G0011043	pseudogene	Chr13:113888416-113888659 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010950	pseudogene	Chr13:122103994-122104237 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011299	pseudogene	Chr13:112056159-112056402 (+)
PWK/PhJ	MGP_PWKPhJ_G0010633	pseudogene	Chr13:107764792-107765035 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010453	pseudogene	Chr13:108378717-108378959 (+)
WSB/EiJ	MGP_WSBEiJ_G0010808	pseudogene	Chr13:112654907-112655150 (+)

Homology

• Gene Tree
  Gm15289
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082258 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082258	Ensembl Gene Model | MGI Sequence Detail	244	C57BL/6J
transcript	ENSMUST00000117793	Ensembl | MGI Sequence Detail	244	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;