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Sms-ps Pseudogene Detail
Summary
  • Symbol
    Sms-ps
  • Name
    spermine synthase, pseudogene
  • Synonyms
    ENSMUSG00000067829, Gm14680
  • Feature Type
    pseudogene
  • IDs
    MGI:3705601
    NCBI Gene: 671878
  • Alliance
Location &
Maps
more
  • Sequence Map
    ChrX:62775585-62776685 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 34.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705601
pseudogene ChrX:62775128-62776685 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0014707
pseudogene ChrX:101709737-101710763 (+)
AKR/J MGP_AKRJ_G0014637
pseudogene ChrX:104931723-104932749 (+)
BALB/cJ MGP_BALBcJ_G0014655
pseudogene ChrX:100542787-100543813 (+)
C3H/HeJ MGP_C3HHeJ_G0014489
pseudogene ChrX:102349603-102350629 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015142
pseudogene ChrX:104825027-104825981 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0014481
pseudogene ChrX:108126740-108127707 (+)
DBA/2J MGP_DBA2J_G0014564
pseudogene ChrX:101003840-101004866 (+)
FVB/NJ MGP_FVBNJ_G0014543
pseudogene ChrX:100298721-100299747 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0014591
pseudogene ChrX:112791751-112792777 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015111
pseudogene ChrX:101554305-101555331 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    SMS, spermine synthase
  • Vertebrate Orthologs
    11
  • Human Ortholog
    SMS, spermine synthase
    Orthology source: HomoloGene
  • Synonyms
    MRSR, SPMSY, SpS, SRS
  • Links
    NCBI Gene ID: 6611
    neXtProt AC: NX_P52788
    UniProt: P52788

  • Chr Location
    Xp22.11; chrX:21940573-21994837 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 88709
    1 human;2 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SMS
  • Gene Tree
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081752 Ensembl Gene Model | MGI Sequence Detail 1101 C57BL/6J ±  kb
transcript ENSMUST00000121773 Ensembl | MGI Sequence Detail 1101 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3704511
References
more
  • Summaries
    All 6
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory