Gm15000 Pseudogene Detail

Summary

• Symbol
  Gm15000
• Name
  predicted gene 15000

• Feature Type
  pseudogene
• IDs
  MGI:3705392
  NCBI Gene: 100416658
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:137423255-137424497 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 60.96 cM

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705392	pseudogene	ChrX:137423255-137424577 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014855	pseudogene	ChrX:135971177-135972419 (-)
A/J	MGP_AJ_G0014849	pseudogene	ChrX:135356627-135357871 (-)
AKR/J	MGP_AKRJ_G0014789	pseudogene	ChrX:139712905-139714147 (-)
BALB/cJ	MGP_BALBcJ_G0014803	pseudogene	ChrX:133739381-133740623 (-)
C3H/HeJ	MGP_C3HHeJ_G0014639	pseudogene	ChrX:136006258-136007500 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015292	pseudogene	ChrX:139997698-139998940 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012937	pseudogene	ChrX:127185589-127186825 (-)
CAST/EiJ	MGP_CASTEiJ_G0014255	pseudogene	ChrX:116775495-116776737 (-)
CBA/J	MGP_CBAJ_G0014628	pseudogene	ChrX:144250412-144251654 (-)
DBA/2J	MGP_DBA2J_G0014712	pseudogene	ChrX:134588650-134589892 (-)
FVB/NJ	MGP_FVBNJ_G0014695	pseudogene	ChrX:133819984-133821226 (-)
LP/J	MGP_LPJ_G0014812	pseudogene	ChrX:136951603-136952845 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014740	pseudogene	ChrX:151671053-151672295 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015273	pseudogene	ChrX:135314088-135315330 (-)
PWK/PhJ	MGP_PWKPhJ_G0014054	pseudogene	ChrX:113780941-113782183 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013846	pseudogene	ChrX:117378014-117379256 (-)
WSB/EiJ	MGP_WSBEiJ_G0014334	pseudogene	ChrX:133640546-133641788 (-)

Homology

• Gene Tree
  Gm15000
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081017 (Evidence)
• NCBI Gene
  100416658

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081017	Ensembl Gene Model | MGI Sequence Detail	1243	C57BL/6J
transcript	ENSMUST00000118275	Ensembl | MGI Sequence Detail	1243	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;