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Selenot-ps Pseudogene Detail
Summary
  • Symbol
    Selenot-ps
  • Name
    selenoprotein T, pseudogene
  • Synonyms
    Gm15359
Location &
Maps
more
  • Sequence Map
    Chr8:19629956-19630548 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 10.35 cM
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705375
 pseudogene Chr8:19629906-19631065 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014052
 pseudogene Chr8:17163613-17164203 (+)
A/J MGP_AJ_G0014067
 pseudogene Chr8:16619513-16620103 (+)
AKR/J MGP_AKRJ_G0014001
 pseudogene Chr8:17164496-17165086 (+)
BALB/cJ MGP_BALBcJ_G0014024
 pseudogene Chr8:16770328-16770918 (+)
C3H/HeJ MGP_C3HHeJ_G0013856
 pseudogene Chr8:17320569-17321159 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014457
 pseudogene Chr8:17625694-17626284 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010866
 pseudogene Chr3:51985060-51999364 (+)
CAST/EiJ MGP_CASTEiJ_G0011791
 pseudogene Chr3:57163257-57179422 (+)
CBA/J MGP_CBAJ_G0013838
 pseudogene Chr8:18588146-18588736 (+)
DBA/2J MGP_DBA2J_G0013916
 pseudogene Chr8:16472506-16473096 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0013999
 pseudogene Chr8:17140324-17140914 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0014430
 pseudogene Chr8:17073711-17074301 (+)
PWK/PhJ MGP_PWKPhJ_G0011636
 pseudogene Chr3:54781441-54794815 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011451
 pseudogene Chr3:56410345-56427006 (+)
WSB/EiJ MGP_WSBEiJ_G0013577
 pseudogene Chr8:17178086-17178676 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081920 Ensembl Gene Model | MGI Sequence Detail 593 C57BL/6J ±  kb
transcript ENSMUST00000119098 Ensembl | MGI Sequence Detail 593 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 1
  • Earliest
    J:332494 Dong X, et al., Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection. Immunity. 2022 Jul 15;55(9):1645-1662
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory