Gm15462 Gene Detail

Summary

• Symbol
  Gm15462
• Name
  predicted gene 15462

• Feature Type
  lncRNA gene
• IDs
  MGI:3705271
  NCBI Gene: 108168861
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:30740234-30746515 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 14.27 cM

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705271	lncRNA gene	Chr3:30740234-30746515 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003725	antisense lncRNA gene	Chr3:28182911-28189713 (+)
A/J	MGP_AJ_G0003706	antisense lncRNA gene	Chr3:27815840-27822143 (+)
AKR/J	MGP_AKRJ_G0003683	antisense lncRNA gene	Chr3:28238892-28245079 (+)
BALB/cJ	MGP_BALBcJ_G0003695	antisense lncRNA gene	Chr3:27509649-27516133 (+)
C3H/HeJ	MGP_C3HHeJ_G0003642	antisense lncRNA gene	Chr3:28265337-28271721 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003835	antisense lncRNA gene	Chr3:29685431-29693234 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003340	antisense lncRNA gene	Chr3:25728991-25735263 (+)
CAST/EiJ	MGP_CASTEiJ_G0003605	antisense lncRNA gene	Chr3:28165293-28172124 (+)
CBA/J	MGP_CBAJ_G0003638	antisense lncRNA gene	Chr3:30428778-30436224 (+)
DBA/2J	MGP_DBA2J_G0003647	antisense lncRNA gene	Chr3:27373343-27379558 (+)
FVB/NJ	MGP_FVBNJ_G0003668	antisense lncRNA gene	Chr3:26815848-26822042 (+)
LP/J	MGP_LPJ_G0003726	antisense lncRNA gene	Chr3:28868742-28874903 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003656	antisense lncRNA gene	Chr3:33019695-33025965 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003836	antisense lncRNA gene	Chr3:27981944-27988097 (+)
PWK/PhJ	MGP_PWKPhJ_G0003561	antisense lncRNA gene	Chr3:26876156-26882512 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003504	antisense lncRNA gene	Chr3:27504786-27512064 (+)
WSB/EiJ	MGP_WSBEiJ_G0003641	antisense lncRNA gene	Chr3:28084984-28091202 (+)

Homology

• Gene Tree
  Gm15462
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000086189 (Evidence)
• NCBI Gene
  108168861

Representative Sequences			Length	Strain/Species
genomic	108168861	NCBI Gene Model | MGI Sequence Detail	6282	C57BL/6J
transcript	NR_166116	RefSeq | MGI Sequence Detail	4580	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;