Gm14963 Gene Detail

Summary

• Symbol
  Gm14963
• Name
  predicted gene 14963

• Feature Type
  lncRNA gene
• IDs
  MGI:3705162
  NCBI Gene: 105246847
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:6318824-6326608 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 4.39 cM

Strain
Comparison

• SNPs within 2kb
  53 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705162	lncRNA gene	Chr19:6318824-6326635 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015377	unclassified non-coding RNA gene	Chr19:3314475-3323118 (-)
A/J	MGP_AJ_G0015351	unclassified non-coding RNA gene	Chr19:3133587-3141247 (-)
AKR/J	MGP_AKRJ_G0015315	unclassified non-coding RNA gene	Chr19:3226649-3234416 (-)
BALB/cJ	MGP_BALBcJ_G0015315	unclassified non-coding RNA gene	Chr19:3129460-3137983 (-)
C3H/HeJ	MGP_C3HHeJ_G0015139	unclassified non-coding RNA gene	Chr19:3246638-3254448 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015769	unclassified non-coding RNA gene	Chr19:3372101-3379911 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013510	unclassified non-coding RNA gene	Chr19:3054636-3062789 (-)
CAST/EiJ	MGP_CASTEiJ_G0014690	unclassified non-coding RNA gene	Chr19:3269785-3277510 (-)
CBA/J	MGP_CBAJ_G0015118	unclassified non-coding RNA gene	Chr19:3541019-3550825 (-)
DBA/2J	MGP_DBA2J_G0015213	unclassified non-coding RNA gene	Chr19:3122567-3130306 (-)
FVB/NJ	MGP_FVBNJ_G0015220	unclassified non-coding RNA gene	Chr19:3135998-3143800 (-)
LP/J	MGP_LPJ_G0015293	unclassified non-coding RNA gene	Chr19:3283393-3291203 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015246	unclassified non-coding RNA gene	Chr19:3345749-3353559 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015808	unclassified non-coding RNA gene	Chr19:3254462-3262376 (-)
PWK/PhJ	MGP_PWKPhJ_G0014480	unclassified non-coding RNA gene	Chr19:3151728-3159683 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014267	unclassified non-coding RNA gene	Chr19:3213833-3221334 (-)
WSB/EiJ	MGP_WSBEiJ_G0014797	unclassified non-coding RNA gene	Chr19:3266197-3274870 (-)

Homology

• Gene Tree
  Gm14963
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  45
• Gene trapped
  45
• Find Mice (IMSR)
  58 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000085196 (Evidence)
• NCBI Gene
  105246847

Representative Sequences			Length	Strain/Species
genomic	105246847	NCBI Gene Model | MGI Sequence Detail	7785	C57BL/6J
transcript	NR_168273	RefSeq | MGI Sequence Detail	2532	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 11

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm14963:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157848	Chr19:6328225-6328250 (-)	-1,630 bp
Tssr157847	Chr19:6327754-6327796 (-)	-1,167 bp