Gm15283 Gene Detail

Summary

• Symbol
  Gm15283
• Name
  predicted gene 15283

• Feature Type
  lncRNA gene
• IDs
  MGI:3705161
  NCBI Gene: 102637576
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:73981498-73999213 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 32.00 cM

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705161	lncRNA gene	Chr12:73889813-73999213 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015232	unclassified non-coding RNA gene	Chr12:73871566-73894711 (-)
A/J	MGP_AJ_G0015206	unclassified non-coding RNA gene	Chr12:71098686-71121831 (-)
AKR/J	MGP_AKRJ_G0015169	unclassified non-coding RNA gene	Chr12:73240133-73263439 (-)
BALB/cJ	MGP_BALBcJ_G0015168	unclassified non-coding RNA gene	Chr12:71577897-71601201 (-)
C3H/HeJ	MGP_C3HHeJ_G0014992	unclassified non-coding RNA gene	Chr12:73705860-73729005 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015625	unclassified non-coding RNA gene	Chr12:76145374-76170197 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013367	unclassified non-coding RNA gene	Chr12:68538517-68561524 (-)
CAST/EiJ	MGP_CASTEiJ_G0014545	unclassified non-coding RNA gene	Chr12:68488043-68511353 (-)
CBA/J	MGP_CBAJ_G0014971	unclassified non-coding RNA gene	Chr12:79091030-79114311 (-)
DBA/2J	MGP_DBA2J_G0015064	unclassified non-coding RNA gene	Chr12:70985833-71009114 (-)
FVB/NJ	MGP_FVBNJ_G0015075	unclassified non-coding RNA gene	Chr12:69829398-69852502 (-)
LP/J	MGP_LPJ_G0015145	unclassified non-coding RNA gene	Chr12:73881673-73904814 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015102	unclassified non-coding RNA gene	Chr12:82173771-82197552 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015664	unclassified non-coding RNA gene	Chr12:72735950-72760810 (-)
PWK/PhJ	MGP_PWKPhJ_G0014337	unclassified non-coding RNA gene	Chr12:65312344-65335976 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014124	unclassified non-coding RNA gene	Chr12:67176611-67199845 (-)
WSB/EiJ	MGP_WSBEiJ_G0014648	unclassified non-coding RNA gene	Chr12:73333095-73357260 (-)

Homology

• Gene Tree
  Gm15283
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm15283
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000087700 (Evidence)
• NCBI Gene
  102637576

Representative Sequences			Length	Strain/Species
genomic	102637576	NCBI Gene Model | MGI Sequence Detail	17716	C57BL/6J
transcript	XR_381691	RefSeq | MGI Sequence Detail	3105	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm15283:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr116670	Chr12:73996605-73996626 (-)	2,597 bp
Tssr116669	Chr12:73996553-73996602 (-)	2,635 bp