Gm15082 Gene Detail

Summary

• Symbol
  Gm15082
• Name
  predicted gene 15082

• Feature Type
  lncRNA gene
• IDs
  MGI:3705124
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:113914700-113917167 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 52.90 cM

Strain
Comparison

• SNPs within 2kb
  40 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705124	lncRNA gene	Chr6:113914700-113917167 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004341	antisense lncRNA gene	Chr6:116487515-116489982 (+)
A/J	MGP_AJ_G0004318	antisense lncRNA gene	Chr6:112019772-112022239 (+)
AKR/J	MGP_AKRJ_G0004301	antisense lncRNA gene	Chr6:115032446-115034913 (+)
BALB/cJ	MGP_BALBcJ_G0004304	antisense lncRNA gene	Chr6:111964514-111966981 (+)
C3H/HeJ	MGP_C3HHeJ_G0004200	antisense lncRNA gene	Chr6:69262156-69264623 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004454	antisense lncRNA gene	Chr6:119486611-119489078 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003922	antisense lncRNA gene	Chr6:109050169-109052649 (+)
CAST/EiJ	MGP_CASTEiJ_G0004215	antisense lncRNA gene	Chr6:115492813-115495283 (+)
CBA/J	MGP_CBAJ_G0004247	antisense lncRNA gene	Chr6:124210201-124212668 (+)
DBA/2J	MGP_DBA2J_G0004262	antisense lncRNA gene	Chr6:111099294-111101762 (+)
FVB/NJ	MGP_FVBNJ_G0004279	antisense lncRNA gene	Chr6:110106059-110108525 (+)
LP/J	MGP_LPJ_G0004342	antisense lncRNA gene	Chr6:116515519-116517986 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004270	antisense lncRNA gene	Chr6:128440226-128442694 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004451	antisense lncRNA gene	Chr6:115052278-115054746 (+)
PWK/PhJ	MGP_PWKPhJ_G0004168	antisense lncRNA gene	Chr6:110065020-110067490 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004111	antisense lncRNA gene	Chr6:113860613-113863085 (+)
WSB/EiJ	MGP_WSBEiJ_G0004252	antisense lncRNA gene	Chr6:115423853-115426321 (+)

Homology

• Gene Tree
  Gm15082
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm15082
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087053 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087053	Ensembl Gene Model | MGI Sequence Detail	2468	C57BL/6J
transcript	ENSMUST00000147045	Ensembl | MGI Sequence Detail	1960	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)