About   Help   FAQ
Hdac1-ps Pseudogene Detail
Summary
  • Symbol
    Hdac1-ps
  • Name
    histone deacetylase 1, pseudogene
  • Synonyms
    EG15181, Gm10093
  • Feature Type
    pseudogene
  • IDs
    MGI:3704479
    NCBI Gene: 15181
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:78491582-78493025 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 49.28 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704479
pseudogene Chr17:78491565-78493541 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019869
protein coding gene Chr12:77835865-77837694 (-)
A/J MGP_AJ_G0019827
protein coding gene Chr12:74832908-74834805 (-)
AKR/J MGP_AKRJ_G0019802
protein coding gene Chr12:77100272-77102101 (-)
BALB/cJ MGP_BALBcJ_G0019806
protein coding gene Chr12:75289754-75291636 (-)
C3H/HeJ MGP_C3HHeJ_G0019612
protein coding gene Chr12:77557990-77559819 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020258
protein coding gene Chr12:80167299-80169128 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017876
protein coding gene Chr12:72132443-72134227 (-)
CAST/EiJ MGP_CASTEiJ_G0022334
protein coding gene Chr16:97135084-97136969 (+)
CBA/J MGP_CBAJ_G0019582
protein coding gene Chr12:83265440-83267269 (-)
DBA/2J MGP_DBA2J_G0019698
protein coding gene Chr12:74696470-74698299 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0019770
protein coding gene Chr12:77765268-77772630 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0020294
protein coding gene Chr12:76607934-76609763 (-)
PWK/PhJ MGP_PWKPhJ_G0018929
protein coding gene Chr12:69040539-69043263 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0019215
protein coding gene Chr12:77182633-77183927 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061062 Ensembl Gene Model | MGI Sequence Detail 1444 C57BL/6J ±  kb
transcript ENSMUST00000079363 Ensembl | MGI Sequence Detail 1444 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3645960
References
more
  • Summaries
    All 12
  • Earliest
    J:42359 Bartl S, et al., Identification of mouse histone deacetylase 1 as a growth factor-inducible gene. Mol Cell Biol. 1997 Sep;17(9):5033-43
  • Latest
    J:89931 Tou L, et al., Regulation of mammalian epithelial differentiation and intestine development by class I histone deacetylases. Mol Cell Biol. 2004 Apr;24(8):3132-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/04/2020
MGI 6.15
The Jackson Laboratory