About   Help   FAQ
Pramel51 Gene Detail
Summary
  • Symbol
    Pramel51
  • Name
    PRAME like 51
  • Synonyms
    Gm10436
  • Feature Type
    protein coding gene
  • IDs
    MGI:3704393
    NCBI Gene: 100039315
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr12:88142359-88148664 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 42.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704393
protein coding gene Chr12:88142359-88148878 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019992
protein coding gene Chr12:89131227-89143075 (-)
A/J MGP_AJ_G0029040
protein coding gene Chr4:140662483-140674232 (+)
AKR/J MGP_AKRJ_G0028997
protein coding gene Chr4:145158235-145164485 (-)
BALB/cJ MGP_BALBcJ_G0019928
protein coding gene Chr12:86165443-86177554 (-)
C3H/HeJ MGP_C3HHeJ_G0028780
protein coding gene Chr4:145606950-145613330 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029511
protein coding gene Chr4:152497989-152502993 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0019706
protein coding gene Chr12:94555782-94570699 (+)
DBA/2J MGP_DBA2J_G0028899
protein coding gene Chr4:141476417-141478931 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0019895
protein coding gene Chr12:88903834-88919845 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019844
protein coding gene Chr12:97328782-97336569 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020412
protein coding gene Chr12:87493346-87496246 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    PRAMEF1, PRAME family member 1
  • Vertebrate Orthologs
    18
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRAMEF1, PRAME family member 1
  • Links
    NCBI Gene ID: 65121
    neXtProt AC: NX_O95521
    UniProt: O95521

  • Chr Location
    1p36.21; chr1:12791397-12796628 (+)  GRCh38.p7




  • Human Ortholog
    PRAMEF13, PRAME family member 13
  • Links
    NCBI Gene ID: 400736
    neXtProt AC: NX_Q5VWM6

  • Chr Location
    1p36.21; chr1:13196188-13201409 (-)  GRCh38.p7

  • Human Ortholog
    PRAMEF14, PRAME family member 14
  • Links
    NCBI Gene ID: 729528
    UniProt: Q5SWL7

  • Chr Location
    1p36.21; chr1:13341892-13347134 (-)  GRCh38.p7



  • Human Ortholog
    PRAMEF18, PRAME family member 18
  • Links
    NCBI Gene ID: 391003
    neXtProt AC: NX_Q5VWM3

  • Chr Location
    1p36.21; chr1:13222695-13226154 (-)  GRCh38.p7


  • Human Ortholog
    PRAMEF2, PRAME family member 2
  • Synonyms
    DJ845O24.3
  • Links
    NCBI Gene ID: 65122
    neXtProt AC: NX_O60811
    UniProt: O60811

  • Chr Location
    1p36.21; chr1:12857086-12861909 (+)  GRCh38.p7

  • Human Ortholog
    PRAMEF20, PRAME family member 20
  • Synonyms
    PRAMEF21
  • Links
    NCBI Gene ID: 645425
    neXtProt AC: NX_Q5VT98
    UniProt: Q5VT98

  • Chr Location
    1p36.21; chr1:13410450-13421328 (+)  GRCh38.p7



  • Human Ortholog
    PRAMEF5, PRAME family member 5
  • Synonyms
    PRAMEF23, PRAMEF5L
  • Links
    NCBI Gene ID: 343068
    neXtProt AC: NX_Q5TYX0
    UniProt: Q5TYX0

  • Chr Location
    1p36.21; chr1:13254198-13263435 (+)  GRCh38.p7



  • Human Ortholog
    PRAMEF8, PRAME family member 8
  • Synonyms
    PRAMEF24
  • Links
    NCBI Gene ID: 391002
    neXtProt AC: NX_Q5VWM4
    UniProt: Q5VWM4

  • Chr Location
    1p36.21; chr1:13281223-13285137 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100039315 NCBI Gene Model | MGI Sequence Detail 6306 C57BL/6J ±  kb
transcript NM_001105254 RefSeq | MGI Sequence Detail 1893 C57BL/6  
polypeptide NP_001098724 RefSeq | MGI Sequence Detail 520 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    8 Sequences
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
Molecular
Reagents
less
  • All nucleic 39
    cDNA 39
References
more
  • Summaries
    All 13
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/12/2021
MGI 6.17
The Jackson Laboratory