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Tdg-ps2 Pseudogene Detail
Summary
  • Symbol
    Tdg-ps2
  • Name
    thymine DNA glycosylase, pseudogene 2
  • Synonyms
    Gm9855
  • Feature Type
    pseudogene
  • IDs
    MGI:3704357
    NCBI Gene: 624784
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr10:41930109-41931302 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 22.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704357
 pseudogene Chr10:41928554-41931449 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011046
 pseudogene Chr13:80774912-80776076 (-)
A/J MGP_AJ_G0011046
 pseudogene Chr13:77979624-77980783 (-)
AKR/J MGP_AKRJ_G0011001
 pseudogene Chr13:80317291-80318450 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0010920
 pseudogene Chr13:80016656-80017820 (-)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0010741
 pseudogene Chr13:79140863-79142037 (-)
CBA/J MGP_CBAJ_G0010892
 pseudogene Chr13:86642470-86643634 (-)
DBA/2J MGP_DBA2J_G0010938
 pseudogene Chr13:77650206-77651370 (-)
FVB/NJ MGP_FVBNJ_G0010949
 pseudogene Chr13:76750248-76751407 (-)
LP/J MGP_LPJ_G0011027
 pseudogene Chr13:81012125-81013284 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010934
 pseudogene Chr13:85352318-85353482 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010714
 pseudogene Chr10:40160083-40161527 (-)
PWK/PhJ MGP_PWKPhJ_G0010619
 pseudogene Chr13:76537426-76538867 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0010791
 pseudogene Chr13:80136629-80137783 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Tdg-ps2
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085666 Ensembl Gene Model | MGI Sequence Detail 1194 C57BL/6J ±  kb
transcript ENSMUST00000121229 Ensembl | MGI Sequence Detail 1194 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 11
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory