Gm9830 Pseudogene Detail

Summary

• Symbol
  Gm9830
• Name
  predicted gene 9830

• Feature Type
  pseudogene
• IDs
  MGI:3704332
  NCBI Gene: 100048057
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:44375540-44375896 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 24.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704332	pseudogene	Chr9:44375460-44376829 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0020693	protein coding gene	Chr13:67013007-67013602 (+)
A/J	MGP_AJ_G0020648	protein coding gene	Chr13:64566622-64567013 (+)
AKR/J	MGP_AKRJ_G0020624	protein coding gene	Chr13:66699382-66704594 (+)
BALB/cJ	MGP_BALBcJ_G0020646	protein coding gene	Chr13:65054485-65054905 (+)
C3H/HeJ	MGP_C3HHeJ_G0032139	protein coding gene	Chr7:84280270-84286136 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0032343	protein coding gene	Chr7:26517822-26518181 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0020505	protein coding gene	Chr13:63486486-63486988 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0032936	protein coding gene	Chr7:83094021-83095487 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0019537	protein coding gene	Chr13:63011732-63012327 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9830
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000094437 (Evidence)
• NCBI Gene
  100048057

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094437	Ensembl Gene Model | MGI Sequence Detail	357	C57BL/6J
transcript	ENSMUST00000178509	Ensembl | MGI Sequence Detail	357	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;