4921514A10Rik Gene Detail

Summary

• Symbol
  4921514A10Rik
• Name
  RIKEN cDNA 4921514A10 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3704238
  NCBI Gene: 100038750
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:140842971-140845398 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 73.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704238	lncRNA gene	Chr4:140842971-140845398 (+)
129S1/SvImJ	ENSMUSG00200046584	lncRNA gene	Chr4:134261290-134263757 (+)
A/J	ENSMUSG00195037072	lncRNA gene	Chr4:135608861-135611288 (+)
AKR/J	ENSMUSG00220048090	lncRNA gene	Chr4:134609676-134612103 (+)
BALB/cJ	ENSMUSG00180046471	lncRNA gene	Chr4:133250025-133252452 (+)
C3H/HeJ	ENSMUSG00175041142	lncRNA gene	Chr4:134276536-134278963 (+)
C57BL/6NJ	ENSMUSG00215051272	lncRNA gene	Chr4:135794410-135796837 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014353	lncRNA gene	Chr4:135233358-135235771 (+)
CBA/J	ENSMUSG00210029825	lncRNA gene	Chr4:133900499-133902926 (+)
DBA/2J	ENSMUSG00185051991	lncRNA gene	Chr4:135413595-135416062 (+)
FVB/NJ	ENSMUSG00205041618	lncRNA gene	Chr4:133664655-133667123 (+)
JF1/MsJ	ENSUMUG00000045820	lncRNA gene	Chr4:136102292-136104719 (+)
LP/J	ENSMUSG00230040769	lncRNA gene	Chr4:139199835-139202302 (+)
NOD/ShiLtJ	ENSMUSG00190033924	lncRNA gene	Chr4:133660223-133662690 (+)
NZO/HlLtJ	ENSMUSG00225010909	lncRNA gene	Chr4:145151889-145154356 (+)
PWK/PhJ	ENSLUMG00010048143	lncRNA gene	Chr4:133099020-133101487 (+)
SPRET/EiJ	ENSMSPG00010036569	lncRNA gene	Chr4:135146327-135148758 (+)
WSB/EiJ	ENSIUOG00005048340	lncRNA gene	Chr4:133548080-133550544 (+)

Homology

• Gene Tree
  4921514A10Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Gene trapped
  1
• Targeted
  1
• Genomic Mutations
  3 involving 4921514A10Rik
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000097620 (Evidence)
• NCBI Gene
  100038750

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097620	Ensembl Gene Model | MGI Sequence Detail	2428	C57BL/6J
transcript	ENSMUST00000187076	Ensembl | MGI Sequence Detail	2116	Not Applicable
polypeptide	Q3V164	UniProt | EBI | MGI Sequence Detail	170	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 12

  Phenotypes 4
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8