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A230020J21Rik Gene Detail
Summary
  • Symbol
    A230020J21Rik
  • Name
    RIKEN cDNA A230020J21 gene
Location &
Maps
more
  • Sequence Map
    Chr1:191025351-191029781 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 96.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704207
lncRNA gene Chr1:191025350-191029781 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002824
antisense lncRNA gene Chr1:198042499-198046913 (+)
A/J MGP_AJ_G0002801
antisense lncRNA gene Chr1:189929198-189935124 (+)
AKR/J MGP_AKRJ_G0002782
antisense lncRNA gene Chr1:195547635-195552062 (+)
BALB/cJ MGP_BALBcJ_G0002788
antisense lncRNA gene Chr1:190602587-190607013 (+)
C3H/HeJ MGP_C3HHeJ_G0002746
antisense lncRNA gene Chr1:196395866-196400345 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002930
antisense lncRNA gene Chr1:204350139-204355832 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002477
antisense lncRNA gene Chr1:180829789-180833998 (+)
CAST/EiJ MGP_CASTEiJ_G0002718
antisense lncRNA gene Chr1:195985936-195990331 (+)
CBA/J MGP_CBAJ_G0002741
antisense lncRNA gene Chr1:211918311-211922724 (+)
DBA/2J MGP_DBA2J_G0002748
antisense lncRNA gene Chr1:188650577-188654902 (+)
FVB/NJ MGP_FVBNJ_G0002768
antisense lncRNA gene Chr1:186775359-186779786 (+)
LP/J MGP_LPJ_G0002824
antisense lncRNA gene Chr1:199217123-199221550 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002758
antisense lncRNA gene Chr1:218627032-218631445 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002935
antisense lncRNA gene Chr1:195434563-195438975 (+)
PWK/PhJ MGP_PWKPhJ_G0002676
antisense lncRNA gene Chr1:187929843-187934410 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002626
antisense lncRNA gene Chr1:194431956-194436725 (+)
WSB/EiJ MGP_WSBEiJ_G0002747
antisense lncRNA gene Chr1:195650254-195654682 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype reference
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 100125339 NCBI Gene Model | MGI Sequence Detail 4431 C57BL/6J ±  kb
transcript NR_027298 RefSeq | MGI Sequence Detail 1649 C57BL/6  
polypeptide Q8CAM2 UniProt | EBI | MGI Sequence Detail 278 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR038806 Spermatogenesis-associated protein 45
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 1
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory