Gm11837 MGI Mouse Gene Detail - MGI:3702175

Symbol

Gm11837
Name

predicted gene 11837

Feature Type

protein coding gene
IDs

MGI:3702175
NCBI Gene: 100038514
Alliance

genome feature page
Transcription Start Sites

3 TSS

Sequence Map

Chr4:14929908-14953030 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 4, 6.44 cM
Mapping Data

1 experiment

SNPs within 2kb

655 from dbSNP Build 142
Strain Annotations

35

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3702175	protein coding gene	Chr4:14929851-14953031 (+)
129S1/SvImJ	ENSMUSG00200000759	protein coding gene	Chr4:11586052-11619717 (+)
129S1/SvImJ	ENSMUSG00200001283	lncRNA gene	Chr4:11586086-11609244 (+)
A/J	ENSMUSG00195017714	lncRNA gene	Chr4:12013245-12036397 (+)
A/J	ENSMUSG00195016055	protein coding gene	Chr4:12013211-12046888 (+)
AKR/J	ENSMUSG00220001393	lncRNA gene	Chr4:11771261-11794423 (+)
AKR/J	ENSMUSG00220001202	protein coding gene	Chr4:11771227-11804893 (+)
BALB/cJ	ENSMUSG00180001989	lncRNA gene	Chr4:11533779-11556939 (+)
BALB/cJ	ENSMUSG00180001870	protein coding gene	Chr4:11533745-11567411 (+)
C3H/HeJ	ENSMUSG00175018656	lncRNA gene	Chr4:12045108-12068292 (+)
C3H/HeJ	ENSMUSG00175017714	protein coding gene	Chr4:12045074-12078766 (+)
C57BL/6NJ	ENSMUSG00215011572	lncRNA gene	Chr4:11681460-11704637 (+)
C57BL/6NJ	ENSMUSG00215009036	protein coding gene	Chr4:11681426-11715111 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003486	antisense lncRNA gene	Chr4:10724397-10749799 (+)
CAST/EiJ	ENSTCUG00005016629	lncRNA gene	Chr4:11687606-11710743 (+)
CAST/EiJ	ENSTCUG00005016058	protein coding gene	Chr4:11688407-11721245 (+)
CBA/J	ENSMUSG00210001618	lncRNA gene	Chr4:11782800-11805978 (+)
CBA/J	ENSMUSG00210001559	protein coding gene	Chr4:11782766-11816452 (+)
DBA/2J	ENSMUSG00185001040	protein coding gene	Chr4:11893062-11926757 (+)
DBA/2J	ENSMUSG00185001406	lncRNA gene	Chr4:11893096-11916283 (+)
FVB/NJ	ENSMUSG00205001857	protein coding gene	Chr4:11438321-11472004 (+)
FVB/NJ	ENSMUSG00205001961	lncRNA gene	Chr4:11438355-11461532 (+)
JF1/MsJ	ENSUMUG00000002046	lncRNA gene	Chr4:11941120-11964333 (+)
JF1/MsJ	ENSUMUG00000001262	protein coding gene	Chr4:11941086-11974833 (+)
LP/J	ENSMUSG00230001420	lncRNA gene	Chr4:15082999-15106156 (+)
LP/J	ENSMUSG00230000827	protein coding gene	Chr4:15082965-15116626 (+)
NOD/ShiLtJ	ENSMUSG00190026804	lncRNA gene	Chr4:11634775-11657926 (+)
NOD/ShiLtJ	ENSMUSG00190025150	protein coding gene	Chr4:11634741-11668417 (+)
NZO/HlLtJ	ENSMUSG00225008687	lncRNA gene	Chr4:19067341-19090523 (+)
NZO/HlLtJ	ENSMUSG00225007742	protein coding gene	Chr4:19067307-19100997 (+)
PWK/PhJ	ENSLUMG00010002007	lncRNA gene	Chr4:11372087-11395335 (+)
PWK/PhJ	ENSLUMG00010001808	protein coding gene	Chr4:11372053-11405844 (+)
SPRET/EiJ	ENSMSPG00010013561	lncRNA gene	Chr4:11842778-11864556 (+)
SPRET/EiJ	ENSMSPG00010013041	protein coding gene	Chr4:11842745-11874958 (+)
WSB/EiJ	ENSIUOG00005008691	lncRNA gene	Chr4:11432434-11455619 (+)

Human Ortholog

C8orf88, chromosome 8 open reading frame 88

Vertebrate Orthologs

1

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

C8orf88, chromosome 8 open reading frame 88
Links

HGNC:44672

NCBI Gene ID: 100127983

UniProt: P0DMB2
Chr Location

8q21.3; chr8:90958084-90985393 (-) GRCh38

MGI Vertebrate Homology

Gm11837 stringent orthology
1 human;1 mouse
HCOP

vertebrate homology predictions: C8orf88
Gene Tree

Gm11837

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Phenotype Summary

1 phenotype reference

All Mutations and Alleles

3
Gene trapped

3
Find Mice (IMSR)

1 strains or lines available

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

606
Tissues

8
cDNA Data

16
Literature Summary

1

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

55
RefSeq

4
UniProt

2

Ensembl

ENSMUSG00000086587 (Evidence)
NCBI Gene

100038514

			Length	Strain/Species	Flank
genomic	100038514	NCBI Gene Model \| MGI Sequence Detail	23123	C57BL/6J	± kb
transcript	NM_001356579	RefSeq \| MGI Sequence Detail	898	C57BL/6
polypeptide	NP_001230029	RefSeq \| MGI Sequence Detail	119	C57BL/6

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UniProt

2 Sequences

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All nucleic 17

cDNA 16

Primer pair 1

Summaries

All 14

Developmental Gene Expression 1

Phenotypes 1
Earliest

J:263878 Aboudehen K, et al., Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. J Biol Chem. 2018 Jun 15;293(24):9388-9398

TSS for Gm11837:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36545	Chr4:14929860-14929871 (+)	-42 bp
Tssr36546	Chr4:14930619-14930701 (+)	752 bp
Tssr36547	Chr4:14930709-14930720 (+)	807 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24