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Trav7-6 Gene Detail
Summary
  • Symbol
    Trav7-6
  • Name
    T cell receptor alpha variable 7-6
  • Feature Type
    gene segment
  • IDs
    MGI:3702133
    NCBI Gene: 213480
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:53954217-53954748 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.48 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3702133
gene segment Chr14:53954173-53954748 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002550
gene segment Chr14:47259891-47260467 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0002503
gene segment Chr14:47846608-47847184 (+)
BALB/cJ MGP_BALBcJ_G0002503
gene segment Chr14:45952405-45952679 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0002230
gene segment Chr14:45092604-45092878 (-)
CAST/EiJ MGP_CASTEiJ_G0002474
gene segment Chr14:44346127-44346401 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0002656
gene segment Chr14:47147411-47147987 (+)
PWK/PhJ MGP_PWKPhJ_G0002424
gene segment Chr14:42614027-42614603 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002382
gene segment Chr14:43363908-43364182 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 213480 NCBI Gene Model | MGI Sequence Detail 532 C57BL/6J ±  kb
polypeptide A0A075B640 UniProt | EBI | MGI Sequence Detail 112 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 11
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/14/2021
MGI 6.17
The Jackson Laboratory