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Gm13117 Pseudogene Detail
Summary
  • Symbol
    Gm13117
  • Name
    predicted gene 13117
  • Feature Type
    pseudogene
  • IDs
    MGI:3701126
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:154128190-154128880 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 83.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3701126
 pseudogene Chr4:154128190-154128880 (-)
129S1/SvImJ MGP_129S1SvImJ_G0012944
 pseudogene Chr4:158287477-158288164 (-)
A/J MGP_AJ_G0012933
 pseudogene Chr4:151646090-151646779 (-)
AKR/J MGP_AKRJ_G0012900
 pseudogene Chr4:155777952-155778641 (-)
BALB/cJ MGP_BALBcJ_G0012912
 pseudogene Chr4:152113639-152114329 (-)
C3H/HeJ MGP_C3HHeJ_G0012765
 pseudogene Chr4:156315171-156315860 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013268
 pseudogene Chr4:163945059-163945749 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011481
 pseudogene Chr4:143947742-143948445 (-)
CAST/EiJ MGP_CASTEiJ_G0012501
 pseudogene Chr4:153712705-153713476 (-)
CBA/J MGP_CBAJ_G0012734
 pseudogene Chr4:168867404-168868093 (-)
DBA/2J MGP_DBA2J_G0012808
 pseudogene Chr4:151672644-151673333 (-)
FVB/NJ MGP_FVBNJ_G0012812
 pseudogene Chr4:150873388-150874077 (-)
LP/J MGP_LPJ_G0012877
 pseudogene Chr4:158193438-158194128 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012827
 pseudogene Chr4:171790446-171791135 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013269
 pseudogene Chr4:156347921-156348610 (-)
PWK/PhJ MGP_PWKPhJ_G0012321
 pseudogene Chr4:147749639-147750391 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012134
 pseudogene Chr4:150635363-150636679 (-)
WSB/EiJ MGP_WSBEiJ_G0012535
 pseudogene Chr4:156513373-156514067 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080807 Ensembl Gene Model | MGI Sequence Detail 691 C57BL/6J ±  kb
transcript ENSMUST00000120894 Ensembl | MGI Sequence Detail 691 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:121726 Bagchi A, et al., CHD5 is a tumor suppressor at human 1p36. Cell. 2007 Feb 9;128(3):459-75
  • Latest
    J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory