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Ifit3b
Gene Detail
Symbol

Name
ID
Ifit3b
interferon-induced protein with tetratricopeptide repeats 3B
MGI:3698419
Synonyms
I830012O16Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 19
29.76 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr19:34607970-34613401 bp, + strand
From VEGA annotation of GRCm38

  5432 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1189  Vertebrate Homology Class
1 human; 2 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: IFIT3
Protein SuperFamily: interferon-induced 56K protein
Gene Tree: Ifit3b

Human
homologs
IFIT3, interferon-induced protein with tetratricopeptide repeats 3
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 3437
neXtProt AC: NX_O14879

Human Synonyms: cig41, CIG-49, GARG-49, IFI60, IFIT4, IRG2, ISG60, P60, RIG-G

Human Chr (Location): 10q24; chr10:89327819-89340968 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF , CvDC )
Interactions
Ifit3b interacts with 153 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component cytoplasm, mitochondrion
Function identical protein binding
Expression
cDNA source data(13)
Other mouse links: GEO   Expression Atlas
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(1)
Other database
links
VEGA Gene Model OTTMUSG00000016648 (Evidence)
Ensembl Gene Model ENSMUSG00000062488 (Evidence)
Entrez Gene 667370 (Evidence)
UniGene 271850
Consensus CDS Project CCDS50423.1
International Mouse Phenotyping Consortium Status Ifit3b
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016648 VEGA Gene Model | MGI Sequence Detail 5432 C57BL/6J ±  kb
transcript OTTMUST00000040266 VEGA | MGI Sequence Detail 2000 Not Applicable 
polypeptide OTTMUSP00000017987 VEGA | MGI Sequence Detail 403 Not Applicable 

For the selected sequences
All sequences(19) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(85 from dbSNP Build 137)    SNPs within 2kb including multiple locations(125)
Protein-related
information
ResourceIDDescription
InterPro IPR024122 Interferon-induced protein with tetratricopeptide repeats 3
InterPro IPR011990 Tetratricopeptide-like helical
InterPro IPR019734 Tetratricopeptide repeat
InterPro IPR013026 Tetratricopeptide repeat-containing domain
InterPro IPR001440 Tetratricopeptide TPR-1
InterPro IPR013105 Tetratricopeptide TPR2
References
(Earliest) J:23000 MGD Nomenclature Committee, 2/14/1995;
(Latest) J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;
All references(14)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory