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Phtf1os Gene Detail
Summary
  • Symbol
    Phtf1os
  • Name
    putative homeodomain transcription factor 1, opposite strand
  • Synonyms
    A130049A11Rik
Location &
Maps
more
  • Sequence Map
    Chr3:103964536-103968316 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 45.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3698050
antisense lncRNA gene Chr3:103964536-103968581 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003807
antisense lncRNA gene Chr3:105269093-105273138 (-)
A/J MGP_AJ_G0003787
antisense lncRNA gene Chr3:101912871-101916916 (-)
AKR/J MGP_AKRJ_G0003763
antisense lncRNA gene Chr3:104399043-104403088 (-)
BALB/cJ MGP_BALBcJ_G0003774
antisense lncRNA gene Chr3:101681586-101685624 (-)
C3H/HeJ MGP_C3HHeJ_G0003721
antisense lncRNA gene Chr3:104772978-104777023 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003916
antisense lncRNA gene Chr3:109164810-109168855 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003419
antisense lncRNA gene Chr3:98038083-98042144 (-)
CAST/EiJ MGP_CASTEiJ_G0003685
antisense lncRNA gene Chr3:103884525-103888570 (-)
CBA/J MGP_CBAJ_G0003716
antisense lncRNA gene Chr3:112897947-112901992 (-)
DBA/2J MGP_DBA2J_G0003727
antisense lncRNA gene Chr3:101156944-101160989 (-)
FVB/NJ MGP_FVBNJ_G0003748
antisense lncRNA gene Chr3:99083267-99087312 (-)
LP/J MGP_LPJ_G0003809
antisense lncRNA gene Chr3:106605763-106609808 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003735
antisense lncRNA gene Chr3:119020991-119025029 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003917
antisense lncRNA gene Chr3:103957164-103961202 (-)
PWK/PhJ MGP_PWKPhJ_G0003641
antisense lncRNA gene Chr3:100933888-100937929 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003585
antisense lncRNA gene Chr3:102020314-102024370 (-)
WSB/EiJ MGP_WSBEiJ_G0003721
antisense lncRNA gene Chr3:104514401-104518446 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Phtf1os
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 100125931 NCBI Gene Model | MGI Sequence Detail 3781 C57BL/6J ±  kb
transcript NR_030676 RefSeq | MGI Sequence Detail 3781 C57BL/6  
polypeptide Q8BQ56 UniProt | EBI | MGI Sequence Detail 118 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Diseases 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/05/2019
MGI 6.14
The Jackson Laboratory