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Vmn2r56 Gene Detail
Summary
  • Symbol
    Vmn2r56
  • Name
    vomeronasal 2, receptor 56
  • Synonyms
    EG629079
  • Feature Type
    protein coding gene
  • IDs
    MGI:3695438
    NCBI Gene: 629079
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:12693860-12733320 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 7.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    107 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3695438
protein coding gene Chr7:12688721-12735004 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031649
protein coding gene Chr7:10089243-10123789 (-)
A/J MGP_AJ_G0031623
protein coding gene Chr7:9929061-9969847 (-)
AKR/J MGP_AKRJ_G0031546
protein coding gene Chr7:10153710-10186772 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0032092
protein coding gene Chr7:10548255-10641841 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031307
protein coding gene Chr7:10793614-10835382 (-)
DBA/2J MGP_DBA2J_G0031464
protein coding gene Chr7:9705935-9862351 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0031549
protein coding gene Chr7:10018606-10033395 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031454
protein coding gene Chr7:10787111-10809010 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032122
protein coding gene Chr7:9940346-9968973 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0030802
protein coding gene Chr7:9962037-9994948 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 629079 NCBI Gene Model | MGI Sequence Detail 39461 C57BL/6J ±  kb
transcript NM_001104648 RefSeq | MGI Sequence Detail 2340 C57BL/6  
polypeptide NP_001098118 RefSeq | MGI Sequence Detail 779 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR000337 GPCR, family 3
    IPR017979 GPCR, family 3, conserved site
    IPR017978 GPCR family 3, C-terminal
    IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
    IPR011500 GPCR, family 3, nine cysteines domain
    IPR038550 GPCR, family 3, nine cysteines domain superfamily
    IPR004073 GPCR, family 3, vomeronasal receptor, type 2
    IPR028082 Periplasmic binding protein-like I
    IPR001828 Receptor, ligand binding region
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 8
    Gene Ontology 1
  • Earliest
    J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory