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Gm12407 Pseudogene Detail
Summary
  • Symbol
    Gm12407
  • Name
    predicted gene 12407
Location &
Maps
more
  • Sequence Map
    Chr4:41791989-41793601 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 22.09 cM
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    4
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3693096
pseudogene Chr4:41791784-41793739 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0040321
pseudogene Chr4:38253880-38290216 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0040319
pseudogene Chr4:38713192-38715016 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039913
pseudogene Chr4:42627842-42628741 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CCL19, C-C motif chemokine ligand 19
  • Vertebrate Orthologs
    14
  • Human Ortholog
    CCL19, C-C motif chemokine ligand 19
    Orthology source: HomoloGene
  • Synonyms
    CKb11, ELC, MIP-3b, MIP3B, SCYA19
  • Links
    NCBI Gene ID: 6363
    neXtProt AC: NX_Q99731
    UniProt: Q99731

  • Chr Location
    9p13.3; chr9:34689570-34691277 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000095298 Ensembl Gene Model | MGI Sequence Detail 1613 C57BL/6J ±  kb
transcript ENSMUST00000180219 Ensembl | MGI Sequence Detail 324 Not Applicable  
polypeptide XP_006538475 RefSeq | MGI Sequence Detail 153 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory