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5430421N21Rik
Gene Detail
 Symbol
Name
ID
5430421N21Rik
RIKEN cDNA 5430421N21 gene
MGI:3690448
Feature Type protein coding gene
Genetic Map
Chromosome 15
56.90 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:101485131-101491512 bp, - strand
From VEGA annotation of GRCm38

  6382 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68248  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: 5430421N21Rik

Human
homologs
Human Homolog KRT83, keratin 83
NCBI Gene ID 3889
neXtProt AC  NX_P78385
Human Synonyms  Hb-3, HB3, KRTHB3
Human Chr (Location)  12q13; chr12:52314301-52321398 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human KRT83
Alleles
and
phenotypes
All alleles(2) : Targeted(2)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component extracellular space, intermediate filament
Function molecular_function
Expression
cDNA source data(6)
External Resources: GEO   ArrayExpress
Molecular
reagents
All nucleic(6) cDNA(6)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000033745 (Evidence)
Ensembl Gene ModelENSMUSG00000067613 (Evidence)
Entrez Gene100126226 (Evidence)
DoTSDT.110836356, DT.55182001
Consensus CDS ProjectCCDS49735.1
International Mouse Knockout Project Status5430421N21Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033745 VEGA Gene Model | MGI Sequence Detail 6382 C57BL/6J ±  kb
transcript OTTMUST00000085039 VEGA | MGI Sequence Detail 1756 Not Applicable 
polypeptide OTTMUSP00000045897 VEGA | MGI Sequence Detail 479 Not Applicable 

For the selected sequences
All sequences(19) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(30 from dbSNP Build 137)    SNPs within 2kb including multiple locations(34)
Protein-related
information
ResourceIDDescription
InterPro IPR001664 Intermediate filament protein
InterPro IPR018039 Intermediate filament protein, conserved site
InterPro IPR003054 Type II keratin
References (Earliest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(18)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory