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Tvp23a Gene Detail
Summary
  • Symbol
    Tvp23a
  • Name
    trans-golgi network vesicle protein 23A
  • Synonyms
    Fam18a
  • Feature Type
    protein coding gene
  • IDs
    MGI:3665441
    NCBI Gene: 383103
Location & Maps
more
  • Sequence Map
    Chr16:10420557-10447362 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      26806 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 5.61 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TVP23A, trans-golgi network vesicle protein 23 homolog A
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TVP23A, trans-golgi network vesicle protein 23 homolog A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FAM18A, YDR084C
  • Links
    NCBI Gene ID: 780776
    neXtProt AC: NX_A6NH52
    UniProt: A6NH52

  • Chr Location
    16p13.13; chr16:10758034-10818902 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025762 VEGA Gene Model | MGI Sequence Detail 26806 C57BL/6J ±  kb
transcript OTTMUST00000063452 VEGA | MGI Sequence Detail 3315 Not Applicable  
polypeptide OTTMUSP00000031367 VEGA | MGI Sequence Detail 222 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    191 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR008564 Protein of unknown function DUF846, eukaryotic
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:126685 Bussink AP, et al., Evolution of Mammalian chitinase(-like) members of family 18 glycosyl hydrolases. Genetics. 2007 Oct;177(2):959-70
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/11/2017
MGI 6.10 		The Jackson Laboratory