Gm12361 Pseudogene Detail

Summary

• Symbol
  Gm12361
• Name
  predicted gene 12361

• Feature Type
  pseudogene
• IDs
  MGI:3652291
  NCBI Gene: 100418366
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:34919134-34920517 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 16.86 cM

Strain
Comparison

• SNPs within 2kb
  55 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652291	pseudogene	Chr4:34919129-34920520 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012604	pseudogene	Chr4:32524336-32525717 (+)
A/J	MGP_AJ_G0012594	pseudogene	Chr4:31348365-31350100 (+)
AKR/J	MGP_AKRJ_G0012559	pseudogene	Chr4:32174045-32175591 (+)
BALB/cJ	MGP_BALBcJ_G0012580	pseudogene	Chr4:31617617-31619462 (+)
C3H/HeJ	MGP_C3HHeJ_G0012441	pseudogene	Chr4:32485360-32487410 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012896	pseudogene	Chr4:33763664-33765004 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011221	pseudogene	Chr4:29440607-29441947 (+)
CAST/EiJ	MGP_CASTEiJ_G0012197	pseudogene	Chr4:32288752-32294633 (+)
CBA/J	MGP_CBAJ_G0012419	pseudogene	Chr4:34877044-34878394 (+)
DBA/2J	MGP_DBA2J_G0012473	pseudogene	Chr4:31319887-31321350 (+)
FVB/NJ	MGP_FVBNJ_G0012477	pseudogene	Chr4:30738583-30739942 (+)
LP/J	MGP_LPJ_G0012546	pseudogene	Chr4:32626706-32628085 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012480	pseudogene	Chr4:37481124-37489702 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012896	pseudogene	Chr4:32196517-32199488 (+)
PWK/PhJ	MGP_PWKPhJ_G0012027	pseudogene	Chr4:31352092-31353450 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012221	pseudogene	Chr4:32199334-32200361 (+)

Homology

• Gene Tree
  Gm12361
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm12361
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000083956 (Evidence)
• NCBI Gene
  100418366

Representative Sequences			Length	Strain/Species
genomic	100418366	NCBI Gene Model | MGI Sequence Detail	1384	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;