Gm11474 Pseudogene Detail

Summary

• Symbol
  Gm11474
• Name
  predicted gene 11474

• Feature Type
  pseudogene
• IDs
  MGI:3652276
  NCBI Gene: 100502654
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:167377086-167377362 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 87.32 cM

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652276	pseudogene	Chr2:167376905-167377362 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011972	pseudogene	Chr2:173274801-173275077 (-)
A/J	MGP_AJ_G0011968	pseudogene	Chr2:166137120-166137396 (-)
AKR/J	MGP_AKRJ_G0011931	pseudogene	Chr2:171095519-171095795 (-)
BALB/cJ	MGP_BALBcJ_G0011945	pseudogene	Chr2:166495871-166496147 (-)
C3H/HeJ	MGP_C3HHeJ_G0011823	pseudogene	Chr2:171462431-171462707 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012240	pseudogene	Chr2:178328099-178328375 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010703	pseudogene	Chr2:159455867-159456141 (-)
CAST/EiJ	MGP_CASTEiJ_G0011605	pseudogene	Chr2:171924757-171925033 (-)
CBA/J	MGP_CBAJ_G0011797	pseudogene	Chr2:184871413-184871689 (-)
DBA/2J	MGP_DBA2J_G0011850	pseudogene	Chr2:165255808-165256084 (-)
FVB/NJ	MGP_FVBNJ_G0011857	pseudogene	Chr2:163780284-163780560 (-)
LP/J	MGP_LPJ_G0011917	pseudogene	Chr2:173285074-173285350 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011857	pseudogene	Chr2:188251540-188251816 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012245	pseudogene	Chr2:171025172-171025448 (-)
PWK/PhJ	MGP_PWKPhJ_G0011455	pseudogene	Chr2:164919956-164920232 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011269	pseudogene	Chr2:169960057-169960333 (-)
WSB/EiJ	MGP_WSBEiJ_G0011628	pseudogene	Chr2:171935248-171935524 (-)

Homology

• Gene Tree
  Gm11474
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082687 (Evidence)
• NCBI Gene
  100502654

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082687	Ensembl Gene Model | MGI Sequence Detail	277	C57BL/6J
transcript	ENSMUST00000120814	Ensembl | MGI Sequence Detail	277	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;