Gm12954 Pseudogene Detail

Summary

• Symbol
  Gm12954
• Name
  predicted gene 12954

• Feature Type
  pseudogene
• IDs
  MGI:3652229
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:119359062-119359743 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 55.42 cM

Strain
Comparison

• SNPs within 2kb
  193 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652229	pseudogene	Chr4:119359062-119359743 (-)
129S1/SvImJ	ENSMUSG00200014645	pseudogene	Chr4:113267013-113267694 (-)
A/J	ENSMUSG00195033827	pseudogene	Chr4:114509871-114510553 (-)
AKR/J	ENSMUSG00220022105	pseudogene	Chr4:113870697-113871378 (-)
BALB/cJ	ENSMUSG00180047011	pseudogene	Chr4:112574714-112575395 (-)
C3H/HeJ	ENSMUSG00175025256	pseudogene	Chr4:113587889-113588570 (-)
C57BL/6NJ	ENSMUSG00215039566	pseudogene	Chr4:114697061-114697742 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011408	pseudogene	Chr4:110056487-110057168 (-)
CAST/EiJ	ENSTCUG00005045663	pseudogene	Chr4:113390973-113391649 (-)
CBA/J	ENSMUSG00210052568	pseudogene	Chr4:113194377-113195058 (-)
DBA/2J	ENSMUSG00185047546	pseudogene	Chr4:114744858-114745540 (-)
FVB/NJ	ENSMUSG00205025707	pseudogene	Chr4:112667378-112668060 (-)
JF1/MsJ	ENSUMUG00000025277	pseudogene	Chr4:114649755-114650436 (-)
LP/J	ENSMUSG00230046449	pseudogene	Chr4:118084758-118085439 (-)
NOD/ShiLtJ	ENSMUSG00190045159	pseudogene	Chr4:112575064-112575745 (-)
NZO/HlLtJ	ENSMUSG00225016913	pseudogene	Chr4:123628136-123628817 (-)
PWK/PhJ	ENSLUMG00010046432	pseudogene	Chr4:112066900-112067581 (-)
SPRET/EiJ	ENSMSPG00010041222	pseudogene	Chr4:114154626-114155299 (-)
WSB/EiJ	ENSIUOG00005047465	pseudogene	Chr4:112884859-112885541 (-)

Homology

• Gene Tree
  Gm12954
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12954
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082009 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082009	Ensembl Gene Model | MGI Sequence Detail	682	C57BL/6J
transcript	ENSMUST00000118610	Ensembl | MGI Sequence Detail	611	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;