Gm13981 Pseudogene Detail

Summary

• Symbol
  Gm13981
• Name
  predicted gene 13981

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3652167
  NCBI Gene: 108168832
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:116886047-116886493 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 59.03 cM

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652167	pseudogene	Chr2:116886047-116886493 (+)
129S1/SvImJ	ENSMUSG00200048654	pseudogene	Chr2:113821803-113822249 (+)
A/J	ENSMUSG00195025476	pseudogene	Chr2:113863717-113864163 (+)
AKR/J	ENSMUSG00220043026	pseudogene	Chr2:113744323-113744769 (+)
BALB/cJ	ENSMUSG00180045111	pseudogene	Chr2:113668916-113669362 (+)
C3H/HeJ	ENSMUSG00175028490	pseudogene	Chr2:114112622-114113043 (+)
C57BL/6NJ	ENSMUSG00215031345	pseudogene	Chr2:113800827-113801273 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017389	pseudogene	Chr2:113054794-113055240 (+)
CBA/J	ENSMUSG00210007561	pseudogene	Chr2:113953719-113954140 (+)
DBA/2J	ENSMUSG00185047905	pseudogene	Chr2:113665720-113666166 (+)
FVB/NJ	ENSMUSG00205043646	pseudogene	Chr2:112878644-112879090 (+)
JF1/MsJ	ENSUMUG00000040924	pseudogene	Chr2:113529278-113529724 (+)
LP/J	ENSMUSG00230023456	pseudogene	Chr2:115481659-115482105 (+)
NOD/ShiLtJ	ENSMUSG00190046118	pseudogene	Chr2:113867520-113867941 (+)
NZO/HlLtJ	ENSMUSG00225004615	pseudogene	Chr2:123353742-123354188 (+)
PWK/PhJ	ENSLUMG00010048581	pseudogene	Chr2:113445158-113445604 (+)
SPRET/EiJ	ENSMSPG00010044011	pseudogene	Chr2:115782172-115782618 (+)
WSB/EiJ	ENSIUOG00005028679	pseudogene	Chr2:113623267-113623688 (+)

Homology

• Gene Tree
  Gm13981
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm13981
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000074930 (Evidence)
• NCBI Gene
  108168832

Representative Sequences			Length	Strain/Species
genomic	108168832	NCBI Gene Model | MGI Sequence Detail	447	C57BL/6J
transcript	XM_036162783	RefSeq | MGI Sequence Detail	447	C57BL/6J
polypeptide	XP_036018676	RefSeq | MGI Sequence Detail	148	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17