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Ldlrad1 Gene Detail
Summary
  • Symbol
    Ldlrad1
  • Name
    low density lipoprotein receptor class A domain containing 1
  • Synonyms
    OTTMUSG00000008594
  • Feature Type
    protein coding gene
  • IDs
    MGI:3652166
    NCBI Gene: 546840
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:107209180-107218060 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 50.16 cM
Strain
Comparison
more
  • SNPs within 2kb
    115 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652166
protein coding gene Chr4:107209078-107221097 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028534
protein coding gene Chr4:107884968-107894081 (+)
A/J MGP_AJ_G0028497
protein coding gene Chr4:104017910-104027758 (+)
AKR/J MGP_AKRJ_G0028444
protein coding gene Chr4:106562717-106572160 (+)
BALB/cJ MGP_BALBcJ_G0028516
protein coding gene Chr4:104212874-104221753 (+)
C3H/HeJ MGP_C3HHeJ_G0028230
protein coding gene Chr4:107314213-107324161 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028956
protein coding gene Chr4:111763584-111772464 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026247
protein coding gene Chr4:99296768-99305557 (+)
CAST/EiJ MGP_CASTEiJ_G0027666
protein coding gene Chr4:105127330-105135995 (+)
CBA/J MGP_CBAJ_G0028199
protein coding gene Chr4:115387203-115396084 (+)
DBA/2J MGP_DBA2J_G0028347
protein coding gene Chr4:103639025-103652656 (+)
FVB/NJ MGP_FVBNJ_G0028315
protein coding gene Chr4:102507162-102519346 (+)
LP/J MGP_LPJ_G0028448
protein coding gene Chr4:108082592-108091472 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028341
protein coding gene Chr4:120677337-120687601 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028992
protein coding gene Chr4:106807714-106816652 (+)
PWK/PhJ MGP_PWKPhJ_G0027392
protein coding gene Chr4:101883886-101892529 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027216
protein coding gene Chr4:104200404-104208955 (+)
WSB/EiJ MGP_WSBEiJ_G0027747
protein coding gene Chr4:106983149-106992786 (+)



Homology
more
  • Human Ortholog
    LDLRAD1, low density lipoprotein receptor class A domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LDLRAD1, low density lipoprotein receptor class A domain containing 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 388633
    neXtProt AC: NX_Q5T700
    UniProt: Q5T700

  • Chr Location
    1p32.3; chr1:54007298-54018186 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
Expression
less
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070877 Ensembl Gene Model | MGI Sequence Detail 8881 C57BL/6J ±  kb
transcript ENSMUST00000094916 Ensembl | MGI Sequence Detail 1093 Not Applicable  
polypeptide ENSMUSP00000092521 Ensembl | MGI Sequence Detail 218 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR036055 LDL receptor-like superfamily
    IPR002172 Low-density lipoprotein (LDL) receptor class A repeat
    IPR040093 Low-density lipoprotein receptor class A domain-containing protein 1
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 19
    Phenotypes 10
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory