Gm13224 Pseudogene Detail

Summary

• Symbol
  Gm13224
• Name
  predicted gene 13224

• Feature Type
  pseudogene
• IDs
  MGI:3652162
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:145130876-145130969 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 78.19 cM

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652162	pseudogene	Chr4:145130876-145130969 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0012919	pseudogene	Chr4:142525662-142525755 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0012746	pseudogene	Chr3:150633456-150633549 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012491	pseudogene	Chr4:145172984-145173077 (+)
CBA/J	MGP_CBAJ_G0012275	pseudogene	Chr3:155823735-155823828 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0012330	pseudogene	Chr3:136976015-136976108 (-)
LP/J	MGP_LPJ_G0012405	pseudogene	Chr3:147009060-147009153 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0012747	pseudogene	Chr3:143740464-143740557 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012089	pseudogene	Chr3:144603880-144603973 (-)

Homology

• Gene Tree
  Gm13224
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13224
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  11

• Ensembl
  ENSMUSG00000084272 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084272	Ensembl Gene Model | MGI Sequence Detail	94	C57BL/6J
transcript	ENSMUST00000119586	Ensembl | MGI Sequence Detail	94	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;