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Pramel18 Gene Detail
Summary
  • Symbol
    Pramel18
  • Name
    PRAME like 18
  • Synonyms
    Gm12800
  • Feature Type
    protein coding gene
  • IDs
    MGI:3652120
    NCBI Gene: 381535
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:101909121-101911908 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 46.99 cM
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652120
protein coding gene Chr4:101909121-101911908 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0028478
protein coding gene Chr4:98879062-98882135 (+)
C3H/HeJ MGP_C3HHeJ_G0028193
protein coding gene Chr4:101875554-101880456 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028918
protein coding gene Chr4:106092092-106095164 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028162
protein coding gene Chr4:109440518-109445520 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0028411
protein coding gene Chr4:102562293-102564815 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0027357
protein coding gene Chr4:96558435-96560520 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027180
protein coding gene Chr4:98799377-98801239 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 381535 NCBI Gene Model | MGI Sequence Detail 2788 C57BL/6J ±  kb
transcript XM_030253988 RefSeq | MGI Sequence Detail 1452 C57BL/6J  
polypeptide B1AUV4 UniProt | EBI | MGI Sequence Detail 484 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory