Gm12470 Pseudogene Detail

Summary

• Symbol
  Gm12470
• Name
  predicted gene 12470

• Feature Type
  pseudogene
• IDs
  MGI:3652113
  NCBI Gene: 100534358
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:53662305-53663341 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 28.73 cM

Strain
Comparison

• SNPs within 2kb
  18 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652113	pseudogene	Chr4:53662296-53663344 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012660	pseudogene	Chr4:52305244-52306292 (+)
A/J	MGP_AJ_G0012649	pseudogene	Chr4:50299498-50300546 (+)
AKR/J	MGP_AKRJ_G0012619	pseudogene	Chr4:51669548-51670596 (+)
BALB/cJ	MGP_BALBcJ_G0012632	pseudogene	Chr4:50485932-50486980 (+)
C3H/HeJ	MGP_C3HHeJ_G0012492	pseudogene	Chr4:52225614-52226662 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012957	pseudogene	Chr4:54225934-54226982 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011262	pseudogene	Chr4:47255833-47256842 (+)
CAST/EiJ	MGP_CASTEiJ_G0012247	pseudogene	Chr4:51874436-51875478 (+)
CBA/J	MGP_CBAJ_G0012472	pseudogene	Chr4:56083508-56084556 (+)
DBA/2J	MGP_DBA2J_G0012530	pseudogene	Chr4:50268911-50269959 (+)
FVB/NJ	MGP_FVBNJ_G0012530	pseudogene	Chr4:49498614-49499662 (+)
LP/J	MGP_LPJ_G0012601	pseudogene	Chr4:52415041-52416089 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012538	pseudogene	Chr4:59282886-59283934 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012961	pseudogene	Chr4:51905010-51906058 (+)
PWK/PhJ	MGP_PWKPhJ_G0012074	pseudogene	Chr4:50219835-50220887 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011887	pseudogene	Chr4:51196520-51197574 (+)
WSB/EiJ	MGP_WSBEiJ_G0012269	pseudogene	Chr4:51810766-51811814 (+)

Homology

• Gene Tree
  Gm12470
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081516 (Evidence)
• NCBI Gene
  100534358

Representative Sequences			Length	Strain/Species
genomic	100534358	NCBI Gene Model | MGI Sequence Detail	1037	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;