Gm11341 Pseudogene Detail

Summary

• Symbol
  Gm11341
• Name
  predicted gene 11341

• Feature Type
  pseudogene
• IDs
  MGI:3652095
  NCBI Gene: 108168051
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:24504285-24504731 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 10.29 cM

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652095	pseudogene	Chr13:24504285-24504731 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010992	pseudogene	Chr13:21783672-21784118 (+)
A/J	MGP_AJ_G0010996	pseudogene	Chr13:21378511-21378957 (+)
AKR/J	MGP_AKRJ_G0010949	pseudogene	Chr13:21639623-21640069 (+)
BALB/cJ	MGP_BALBcJ_G0010969	pseudogene	Chr13:21370687-21371133 (+)
C3H/HeJ	MGP_C3HHeJ_G0010868	pseudogene	Chr13:21713791-21714237 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011251	pseudogene	Chr13:22569933-22570379 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009839	pseudogene	Chr13:20147554-20147999 (+)
CAST/EiJ	MGP_CASTEiJ_G0010692	pseudogene	Chr13:21408489-21408934 (+)
CBA/J	MGP_CBAJ_G0010841	pseudogene	Chr13:23424567-23425013 (+)
DBA/2J	MGP_DBA2J_G0010888	pseudogene	Chr13:20902060-20902506 (+)
FVB/NJ	MGP_FVBNJ_G0010899	pseudogene	Chr13:20546357-20546803 (+)
LP/J	MGP_LPJ_G0010974	pseudogene	Chr13:22096847-22097293 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010885	pseudogene	Chr13:23729129-23729575 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011229	pseudogene	Chr13:21486233-21486679 (+)
PWK/PhJ	MGP_PWKPhJ_G0010577	pseudogene	Chr13:20941865-20942310 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010397	pseudogene	Chr13:20317489-20317934 (+)
WSB/EiJ	MGP_WSBEiJ_G0010739	pseudogene	Chr13:21639479-21639925 (+)

Homology

• Gene Tree
  Gm11341
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm11341
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000081909 (Evidence)
• NCBI Gene
  108168051

Representative Sequences			Length	Strain/Species
genomic	108168051	NCBI Gene Model | MGI Sequence Detail	447	C57BL/6J

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14