Gm14439 Pseudogene Detail

Summary

• Symbol
  Gm14439
• Name
  predicted gene 14439

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3652090
  NCBI Gene: 108168824
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:174904229-174904669 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 98.24 cM

Strain
Comparison

• SNPs within 2kb
  17 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652090	pseudogene	Chr2:174903752-174904719 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010525	pseudogene	Chr10:60631802-60632163 (+)
A/J	MGP_AJ_G0010518	pseudogene	Chr10:58825203-58825668 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0010491	pseudogene	Chr10:58901380-58901741 (+)
C3H/HeJ	MGP_C3HHeJ_G0009956	pseudogene	Chr1:28862117-28862478 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012254	pseudogene	Chr2:188805811-188806359 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010240	pseudogene	Chr10:60252876-60253237 (+)
CBA/J	MGP_CBAJ_G0010385	pseudogene	Chr10:65147357-65147718 (+)
DBA/2J	MGP_DBA2J_G0010418	pseudogene	Chr10:58099421-58099782 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0010507	pseudogene	Chr10:61043179-61043722 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010405	pseudogene	Chr10:67476997-67477358 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010733	pseudogene	Chr10:60176773-60177134 (+)
PWK/PhJ	MGP_PWKPhJ_G0010139	pseudogene	Chr10:57934052-57934638 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009951	pseudogene	Chr10:59638593-59638946 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm14439
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  2

• Ensembl
  ENSMUSG00000084050 (Evidence)
• NCBI Gene
  108168824

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084050	Ensembl Gene Model | MGI Sequence Detail	441	C57BL/6J
transcript	ENSMUST00000122320	Ensembl | MGI Sequence Detail	441	Not Applicable
polypeptide	XP_036018660	RefSeq | MGI Sequence Detail	148	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;