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Gm12820 Pseudogene Detail
Summary
  • Symbol
    Gm12820
  • Name
    predicted gene 12820
  • Feature Type
    pseudogene
  • IDs
    MGI:3652018
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:111978200-111978541 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 51.53 cM
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652018
 pseudogene Chr4:111978200-111978541 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014841
 pseudogene ChrX:134144222-134144559 (-)
A/J MGP_AJ_G0011498
 pseudogene Chr19:58784152-58784489 (+)
AKR/J MGP_AKRJ_G0011463
 pseudogene Chr19:60603773-60604109 (+)
BALB/cJ MGP_BALBcJ_G0011478
 pseudogene Chr19:58856254-58856590 (+)
C3H/HeJ MGP_C3HHeJ_G0014626
 pseudogene ChrX:134183584-134183921 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013124
 pseudogene Chr4:117098487-117098828 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009133
 pseudogene Chr1:54928853-54929183 (+)
CAST/EiJ MGP_CASTEiJ_G0009902
 pseudogene Chr1:59828899-59829205 (+)
CBA/J MGP_CBAJ_G0011335
 pseudogene Chr19:66333772-66334108 (+)
DBA/2J MGP_DBA2J_G0014699
 pseudogene ChrX:132841510-132841847 (-)
FVB/NJ MGP_FVBNJ_G0014684
 pseudogene ChrX:132049834-132050170 (-)
LP/J MGP_LPJ_G0014798
 pseudogene ChrX:135112314-135112650 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0014729
 pseudogene ChrX:149584921-149585258 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013135
 pseudogene Chr4:111859665-111860006 (-)
PWK/PhJ MGP_PWKPhJ_G0009807
 pseudogene Chr1:57496886-57497190 (+)
SPRET/EiJ MGP_SPRETEiJ_G0009619
 pseudogene Chr1:59809993-59810324 (+)
WSB/EiJ MGP_WSBEiJ_G0009968
 pseudogene Chr1:59999098-59999404 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Genomic Mutations
    4 involving Gm12820
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084326 Ensembl Gene Model | MGI Sequence Detail 342 C57BL/6J ±  kb
transcript ENSMUST00000119233 Ensembl | MGI Sequence Detail 342 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 5
  • Earliest
    J:262448 Narita T, et al., Mice lacking all of the Skint family genes. Int Immunol. 2018 Apr 26;
  • Latest
    J:323863 McKenzie DR, et al., Normality sensing licenses local T cells for innate-like tissue surveillance. Nat Immunol. 2022 Mar;23(3):411-422
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory