Gm13847 Gene Detail

Summary

• Symbol
  Gm13847
• Name
  predicted gene 13847

• Feature Type
  lncRNA gene
• IDs
  MGI:3651994
  NCBI Gene: 102634036
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:31643095-31657632 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 12.57 cM

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651994	lncRNA gene	Chr6:31643095-31657632 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  7
• RefSeq
  3

• NCBI Gene
  102634036

Representative Sequences			Length	Strain/Species
genomic	102634036	NCBI Gene Model | MGI Sequence Detail	14538	C57BL/6J
transcript	AK080631	GenBank | ENA | DDBJ | MGI Sequence Detail	790	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm13847:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr55470	Chr6:31656267-31656274 (+)	13,176 bp