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Gm12709 Gene Detail
Summary
  • Symbol
    Gm12709
  • Name
    predicted gene 12709
Location &
Maps
more
  • Sequence Map
    Chr4:102824463-102846952 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 47.24 cM
Strain
Comparison
more
  • SNPs within 2kb
    719 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651946
 lncRNA gene Chr4:102824463-102846954 (-)
129S1/SvImJ ENSMUSG00200030630
 lncRNA gene Chr4:97849684-97872169 (-)
A/J ENSMUSG00195008532
 lncRNA gene Chr4:98410055-98432513 (-)
AKR/J ENSMUSG00220006846
 lncRNA gene Chr4:97825148-97847642 (-)
BALB/cJ ENSMUSG00180035387
 lncRNA gene Chr4:97279490-97301947 (-)
C3H/HeJ ENSMUSG00175015242
 lncRNA gene Chr4:98278862-98301318 (-)
C57BL/6NJ ENSMUSG00215021518
 lncRNA gene Chr4:98204290-98226787 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003528
 antisense lncRNA gene Chr4:95110696-95133543 (-)
CAST/EiJ ENSTCUG00005007682
 lncRNA gene Chr4:97442383-97464663 (-)
CBA/J ENSMUSG00210029858
 lncRNA gene Chr4:97902503-97924959 (-)
DBA/2J ENSMUSG00185022603
 lncRNA gene Chr4:98601712-98624203 (-)
FVB/NJ ENSMUSG00205016160
 lncRNA gene Chr4:96788269-96810763 (-)
JF1/MsJ ENSUMUG00000043407
 lncRNA gene Chr4:98668681-98691449 (-)
LP/J ENSMUSG00230023360
 lncRNA gene Chr4:101906520-101929012 (-)
NOD/ShiLtJ ENSMUSG00190033460
 lncRNA gene Chr4:97273911-97296403 (-)
NZO/HlLtJ ENSMUSG00225033035
 lncRNA gene Chr4:107023812-107046292 (-)
PWK/PhJ ENSLUMG00010018538
 lncRNA gene Chr4:96385481-96407949 (-)
SPRET/EiJ ENSMSPG00010008567
 lncRNA gene Chr4:98596731-98618731 (-)
WSB/EiJ ENSIUOG00005003328
 lncRNA gene Chr4:97499463-97521937 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Gm12709
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100504717 NCBI Gene Model | MGI Sequence Detail 22490 C57BL/6J ±  kb
transcript NR_040444 RefSeq | MGI Sequence Detail 1912 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 6
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory