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Rpl36a-ps4 Pseudogene Detail
Summary
  • Symbol
    Rpl36a-ps4
  • Name
    ribosomal protein L36A, pseudogene 4
  • Synonyms
    Gm13635
  • Feature Type
    pseudogene
  • IDs
    MGI:3651804
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:72190591-72190886 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 43.26 cM
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651804
 pseudogene Chr2:72190591-72190886 (+)
129S1/SvImJ MGP_129S1SvImJ_G0011692
 pseudogene Chr2:72542789-72543084 (+)
A/J MGP_AJ_G0011688
 pseudogene Chr2:69695858-69696153 (+)
AKR/J MGP_AKRJ_G0011654
 pseudogene Chr2:71632676-71632971 (+)
BALB/cJ MGP_BALBcJ_G0011669
 pseudogene Chr2:69908264-69908559 (+)
C3H/HeJ MGP_C3HHeJ_G0011555
 pseudogene Chr2:71820724-71821019 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011963
 pseudogene Chr2:74725015-74725310 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010475
 pseudogene Chr2:66925403-66925698 (+)
CAST/EiJ MGP_CASTEiJ_G0011343
 pseudogene Chr2:72026306-72026599 (+)
CBA/J MGP_CBAJ_G0011528
 pseudogene Chr2:77461113-77461408 (+)
DBA/2J MGP_DBA2J_G0011580
 pseudogene Chr2:69325148-69325443 (+)
FVB/NJ MGP_FVBNJ_G0011585
 pseudogene Chr2:68734348-68734643 (+)
LP/J MGP_LPJ_G0011648
 pseudogene Chr2:72428508-72428803 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011585
 pseudogene Chr2:79418284-79418579 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011956
 pseudogene Chr2:71707033-71707328 (+)
PWK/PhJ MGP_PWKPhJ_G0011200
 pseudogene Chr2:69211562-69211855 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011023
 pseudogene Chr2:71910647-71910942 (+)
WSB/EiJ MGP_WSBEiJ_G0011371
 pseudogene Chr2:72160578-72160873 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084261 Ensembl Gene Model | MGI Sequence Detail 296 C57BL/6J ±  kb
transcript ENSMUST00000121019 Ensembl | MGI Sequence Detail 296 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 16
    Phenotypes 13
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:239094 Schep R, et al., Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape. Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7720-E7729
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory