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Gm12657 Pseudogene Detail
Summary
  • Symbol
    Gm12657
  • Name
    predicted gene 12657
Location &
Maps
more
  • Sequence Map
    Chr4:94599385-94599795 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 43.34 cM
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651714
pseudogene Chr4:94593650-94600319 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0011580
pseudogene Chr2:30823908-30824317 (-)
AKR/J MGP_AKRJ_G0011545
pseudogene Chr2:31925187-31925596 (-)
BALB/cJ MGP_BALBcJ_G0011561
pseudogene Chr2:30939863-30940272 (-)
C3H/HeJ MGP_C3HHeJ_G0011445
pseudogene Chr2:31801921-31804168 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014199
pseudogene Chr7:15126872-15127278 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0011418
pseudogene Chr2:34430479-34430888 (-)
DBA/2J MGP_DBA2J_G0011475
pseudogene Chr2:30602101-30602510 (-)
FVB/NJ MGP_FVBNJ_G0011475
pseudogene Chr2:30488708-30489117 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0011475
pseudogene Chr2:33981808-33982217 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014177
pseudogene Chr7:14227346-14227752 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    H3-5, H3.5 histone
  • Vertebrate Orthologs
    15
  • Human Ortholog
    H3-5, H3.5 histone
    Orthology source: HomoloGene
  • Synonyms
    H3.5, H3F3C
  • Links
    NCBI Gene ID: 440093
    neXtProt AC: NX_Q6NXT2
    UniProt: Q6NXT2

  • Chr Location
    12p11.21; chr12:31791185-31792241 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Gm12657
  • Find Mice (IMSR)
Expression
less
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063314 Ensembl Gene Model | MGI Sequence Detail 411 C57BL/6J ±  kb
transcript ENSMUST00000119560 Ensembl | MGI Sequence Detail 411 Not Applicable  
polypeptide NP_001074488 RefSeq | MGI Sequence Detail 136 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 3
  • Earliest
    J:224673 Maehara K, et al., Tissue-specific expression of histone H3 variants diversified after species separation. Epigenetics Chromatin. 2015;8:35

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory