Gm13120 Pseudogene Detail

Summary

• Symbol
  Gm13120
• Name
  predicted gene 13120

• Feature Type
  pseudogene
• IDs
  MGI:3651691
  NCBI Gene: 666150
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:144023262-144024707 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 77.98 cM

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651691	pseudogene	Chr4:144023262-144024904 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012927	pseudogene	Chr4:147644233-147645677 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0012884	pseudogene	Chr4:145311449-145312709 (+)
BALB/cJ	MGP_BALBcJ_G0012890	pseudogene	Chr4:141606311-141621718 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0013230	pseudogene	Chr4:152305639-152307191 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012718	pseudogene	Chr4:157357810-157359070 (+)
DBA/2J	MGP_DBA2J_G0012785	pseudogene	Chr4:141593117-141594561 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0012860	pseudogene	Chr4:147704906-147706266 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13120
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13120
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  1

• Ensembl
  ENSMUSG00000095960 (Evidence)
• NCBI Gene
  666150

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095960	Ensembl Gene Model | MGI Sequence Detail	1446	C57BL/6J
transcript	ENSMUST00000117343	Ensembl | MGI Sequence Detail	1446	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;