Klf18 Gene Detail

Summary

• Symbol
  Klf18
• Name
  Kruppel-like transcription factor 18
• Synonyms
  Gm12845

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3651666
  NCBI Gene: 100416740
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:117581771-117583168 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 53.46 cM

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651666	protein coding gene	Chr4:117581609-117584069 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0028653	protein coding gene	Chr4:118712043-118714503 (+)
A/J	MGP_AJ_G0028614	protein coding gene	Chr4:114137656-114140116 (+)
AKR/J	MGP_AKRJ_G0028564	protein coding gene	Chr4:116635809-116638269 (+)
BALB/cJ	MGP_BALBcJ_G0028635	protein coding gene	Chr4:114759328-114761788 (+)
C3H/HeJ	MGP_C3HHeJ_G0028349	protein coding gene	Chr4:118217820-118220280 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0029076	protein coding gene	Chr4:123282181-123284641 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0026360	protein coding gene	Chr4:108166507-108168939 (+)
CAST/EiJ	MGP_CASTEiJ_G0027783	protein coding gene	Chr4:115425957-115428417 (+)
CBA/J	MGP_CBAJ_G0028316	protein coding gene	Chr4:126656443-126658903 (+)
DBA/2J	MGP_DBA2J_G0028464	protein coding gene	Chr4:114755716-114758176 (+)
FVB/NJ	MGP_FVBNJ_G0028432	protein coding gene	Chr4:113271619-113274079 (+)
LP/J	MGP_LPJ_G0028566	protein coding gene	Chr4:118897847-118900307 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0028459	protein coding gene	Chr4:131569659-131572119 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0029113	protein coding gene	Chr4:117781488-117783948 (+)
PWK/PhJ	MGP_PWKPhJ_G0027509	protein coding gene	Chr4:111573164-111575624 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0027332	protein coding gene	Chr4:114092402-114094865 (+)
WSB/EiJ	MGP_WSBEiJ_G0027862	protein coding gene	Chr4:117673995-117676455 (+)

Homology

• Human Ortholog
  KLF18, KLF transcription factor 18

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  KLF18, KLF transcription factor 18
  
• Links
  HGNC:51793

  NCBI Gene ID: 105378952

  UniProt: A0A0U1RQI7

  
  
• Chr Location
  chr1:44137821-44141631 (-)  GRCh38

---

• MGI Vertebrate Homology
  Klf18 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: KLF18
• Gene Tree
  Klf18
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Klf18
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  6
• GO References
  1

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108127 (Evidence)
• NCBI Gene
  100416740

Representative Sequences			Length	Strain/Species
genomic	100416740	NCBI Gene Model | MGI Sequence Detail	1398	C57BL/6J

References

• Summaries
  All 9

  Gene Ontology 1

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:161428 Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas, Annotation inferences using phylogenetic trees. 2010;