Gm11292 Gene Detail

Summary

• Symbol
  Gm11292
• Name
  predicted gene 11292

• Feature Type
  lncRNA gene
• IDs
  MGI:3651660
  NCBI Gene: 193453
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:22210869-22216366 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 8.14 cM

Strain
Comparison

• SNPs within 2kb
  8 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651660	lncRNA gene	Chr13:22210869-22216366 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015248	unclassified non-coding RNA gene	Chr13:19346175-19351163 (+)
A/J	MGP_AJ_G0015222	unclassified non-coding RNA gene	Chr13:18901011-18905980 (+)
AKR/J	MGP_AKRJ_G0015185	unclassified non-coding RNA gene	Chr13:19230729-19235557 (+)
BALB/cJ	MGP_BALBcJ_G0015184	unclassified non-coding RNA gene	Chr13:18948636-18953667 (+)
C3H/HeJ	MGP_C3HHeJ_G0015008	unclassified non-coding RNA gene	Chr13:19324373-19330102 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015641	unclassified non-coding RNA gene	Chr13:20027004-20031819 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013383	unclassified non-coding RNA gene	Chr13:17190602-17196209 (+)
CAST/EiJ	MGP_CASTEiJ_G0014561	unclassified non-coding RNA gene	Chr13:19119698-19126344 (+)
CBA/J	MGP_CBAJ_G0014987	unclassified non-coding RNA gene	Chr13:20682701-20689980 (+)
DBA/2J	MGP_DBA2J_G0015080	unclassified non-coding RNA gene	Chr13:18540079-18544952 (+)
FVB/NJ	MGP_FVBNJ_G0015091	unclassified non-coding RNA gene	Chr13:18194100-18199085 (+)
LP/J	MGP_LPJ_G0015161	unclassified non-coding RNA gene	Chr13:19576223-19581139 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015118	unclassified non-coding RNA gene	Chr13:21088638-21093695 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015680	unclassified non-coding RNA gene	Chr13:19030554-19035362 (+)
PWK/PhJ	MGP_PWKPhJ_G0014353	unclassified non-coding RNA gene	Chr13:18561132-18567284 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014140	unclassified non-coding RNA gene	Chr13:18017736-18025493 (+)
WSB/EiJ	MGP_WSBEiJ_G0014664	unclassified non-coding RNA gene	Chr13:19149106-19154243 (+)

Homology

• Gene Tree
  Gm11292
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm11292
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000043145 (Evidence)
• NCBI Gene
  193453

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000043145	Ensembl Gene Model | MGI Sequence Detail	5498	C57BL/6J
transcript	ENSMUST00000146121	Ensembl | MGI Sequence Detail	1153	Not Applicable
polypeptide	Q8C9G2	UniProt | EBI | MGI Sequence Detail	120	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 18

  Phenotypes 9
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582