Gm13531 Pseudogene Detail

Summary

• Symbol
  Gm13531
• Name
  predicted gene 13531

• Feature Type
  pseudogene
• IDs
  MGI:3651643
  NCBI Gene: 271788
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:57315179-57315721 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 31.84 cM

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651643	pseudogene	Chr2:57315125-57328160 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011651	pseudogene	Chr2:56927885-56928427 (-)
A/J	MGP_AJ_G0011650	pseudogene	Chr2:54748793-54749335 (-)
AKR/J	MGP_AKRJ_G0011614	pseudogene	Chr2:56252141-56252683 (-)
BALB/cJ	MGP_BALBcJ_G0011630	pseudogene	Chr2:54855407-54855949 (-)
C3H/HeJ	MGP_C3HHeJ_G0011516	pseudogene	Chr2:56327863-56328405 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011921	pseudogene	Chr2:58682020-58682562 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010447	pseudogene	Chr2:52376654-52377196 (-)
CAST/EiJ	MGP_CASTEiJ_G0011309	pseudogene	Chr2:56351590-56353556 (-)
CBA/J	MGP_CBAJ_G0011487	pseudogene	Chr2:60813503-60814045 (-)
DBA/2J	MGP_DBA2J_G0011543	pseudogene	Chr2:54366354-54366896 (-)
FVB/NJ	MGP_FVBNJ_G0011545	pseudogene	Chr2:53911223-53911765 (-)
LP/J	MGP_LPJ_G0011609	pseudogene	Chr2:56805218-56805760 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011544	pseudogene	Chr2:62520963-62521505 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011913	pseudogene	Chr2:56235502-56236044 (-)
PWK/PhJ	MGP_PWKPhJ_G0011167	pseudogene	Chr2:54183113-54184480 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010988	pseudogene	Chr2:56371633-56372177 (-)
WSB/EiJ	MGP_WSBEiJ_G0011333	pseudogene	Chr2:56546210-56546752 (-)

Homology

• Gene Tree
  Gm13531
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13531
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084338 (Evidence)
• NCBI Gene
  271788

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084338	Ensembl Gene Model | MGI Sequence Detail	543	C57BL/6J
transcript	ENSMUST00000121893	Ensembl | MGI Sequence Detail	543	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;