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Susd1 Gene Detail
Summary
  • Symbol
    Susd1
  • Name
    sushi domain containing 1
  • Synonyms
    Gm12528
  • Feature Type
    protein coding gene
  • IDs
    MGI:3651543
    NCBI Gene: 634731
Location & Maps
more
  • Sequence Map
    Chr4:59314683-59438633 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      123951 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 32.50 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    SUSD1, sushi domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SUSD1, sushi domain containing 1
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 64420
    neXtProt AC: NX_Q6UWL2

  • Chr Location
    9q31.3-q33.1; chr9:112040781-112175520 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Gene trapped
    2
  • Targeted
    2
  • Incidental Mutations
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007332 VEGA Gene Model | MGI Sequence Detail 123951 C57BL/6J ±  kb
transcript OTTMUST00000016968 VEGA | MGI Sequence Detail 3220 Not Applicable  
polypeptide OTTMUSP00000007824 VEGA | MGI Sequence Detail 699 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1078 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR018097 EGF-like calcium-binding, conserved site
    IPR001881 EGF-like calcium-binding domain
    IPR013032 EGF-like, conserved site
    IPR000742 EGF-like domain
    IPR000152 EGF-type aspartate/asparagine hydroxylation site
    IPR023413 Green fluorescent protein-like
    IPR009030 Growth factor receptor cysteine-rich domain
    IPR000436 Sushi/SCR/CCP domain
Molecular
Reagents
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  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Phenotypes 6
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory