Gm13122 Pseudogene Detail

Summary

• Symbol
  Gm13122
• Name
  predicted gene 13122

• Feature Type
  pseudogene
• IDs
  MGI:3651474
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:144072167-144072619 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 77.98 cM

Strain
Comparison

• SNPs within 2kb
  39 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651474	pseudogene	Chr4:144072167-144072619 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040384	pseudogene	Chr4:147698085-147698545 (-)
A/J	MGP_AJ_G0040366	pseudogene	Chr4:141413038-141413490 (-)
AKR/J	MGP_AKRJ_G0040298	pseudogene	Chr4:145387479-145387931 (-)
BALB/cJ	MGP_BALBcJ_G0040371	pseudogene	Chr4:142054807-142055259 (-)
C3H/HeJ	MGP_C3HHeJ_G0039993	pseudogene	Chr4:145823424-145823876 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040974	pseudogene	Chr4:152678432-152678884 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037352	pseudogene	Chr4:133942739-133943190 (-)
CAST/EiJ	MGP_CASTEiJ_G0039061	pseudogene	Chr4:143917388-143918062 (-)
CBA/J	MGP_CBAJ_G0039956	pseudogene	Chr4:157435862-157436314 (-)
DBA/2J	MGP_DBA2J_G0040165	pseudogene	Chr4:141650845-141651297 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0040206	pseudogene	Chr4:147755497-147755958 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040110	pseudogene	Chr4:160596966-160597523 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041062	pseudogene	Chr4:145863486-145863938 (-)
PWK/PhJ	MGP_PWKPhJ_G0038748	pseudogene	Chr4:137913954-137914406 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038454	pseudogene	Chr4:141136721-141137173 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13122
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13122
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000084312 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084312	Ensembl Gene Model | MGI Sequence Detail	453	C57BL/6J
transcript	ENSMUST00000118380	Ensembl | MGI Sequence Detail	453	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;