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Ptf1aos Gene Detail
Summary
  • Symbol
    Ptf1aos
  • Name
    pancreas specific transcription factor 1a, opposite strand
  • Synonyms
    Gm13336
Location &
Maps
more
  • Sequence Map
    Chr2:19446319-19451485 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 13.36 cM
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651438
antisense lncRNA gene Chr2:19446319-19451485 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003512
antisense lncRNA gene Chr2:17181895-17188078 (-)
A/J MGP_AJ_G0003492
antisense lncRNA gene Chr2:16474843-16479949 (-)
AKR/J MGP_AKRJ_G0003471
antisense lncRNA gene Chr2:17046857-17051963 (-)
BALB/cJ MGP_BALBcJ_G0003481
antisense lncRNA gene Chr2:16529410-16538216 (-)
C3H/HeJ MGP_C3HHeJ_G0003429
antisense lncRNA gene Chr2:16954009-16959096 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003619
antisense lncRNA gene Chr2:17645519-17655072 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003129
antisense lncRNA gene Chr2:15852748-15858622 (-)
CAST/EiJ MGP_CASTEiJ_G0003392
antisense lncRNA gene Chr2:16905926-16913907 (-)
CBA/J MGP_CBAJ_G0003426
antisense lncRNA gene Chr2:18406128-18411281 (-)
DBA/2J MGP_DBA2J_G0003434
antisense lncRNA gene Chr2:16414979-16420083 (-)
FVB/NJ MGP_FVBNJ_G0003453
antisense lncRNA gene Chr2:16219648-16224721 (-)
LP/J MGP_LPJ_G0003507
antisense lncRNA gene Chr2:17000137-17005242 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003441
antisense lncRNA gene Chr2:18353304-18358392 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003622
antisense lncRNA gene Chr2:16983229-16989477 (-)
PWK/PhJ MGP_PWKPhJ_G0003348
antisense lncRNA gene Chr2:16290876-16296042 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003293
antisense lncRNA gene Chr2:17118521-17123618 (-)
WSB/EiJ MGP_WSBEiJ_G0003427
antisense lncRNA gene Chr2:17062943-17068079 (-)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotypes from multigenic genotypes
    1 phenotype reference
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 102637107 NCBI Gene Model | MGI Sequence Detail 5167 C57BL/6J ±  kb
transcript NR_131924 RefSeq | MGI Sequence Detail 916 C57BL/6  
For the selected sequence
Molecular
Reagents
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  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 8
    Developmental Gene Expression 1
    Phenotypes 1
  • Earliest
    J:195133 Semba K, et al., Ectopic expression of Ptf1a induces spinal defects, urogenital defects, and anorectal malformations in Danforth's short tail mice. PLoS Genet. 2013 Feb;9(2):e1003204

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/23/2021
MGI 6.17
The Jackson Laboratory