Gm12443 Pseudogene Detail

Summary

• Symbol
  Gm12443
• Name
  predicted gene 12443

• Feature Type
  pseudogene
• IDs
  MGI:3651437
  NCBI Gene: 100040643
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:46419980-46420302 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 24.76 cM

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651437	pseudogene	Chr4:46419980-46420302 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012636	pseudogene	Chr4:44729802-44730124 (-)
A/J	MGP_AJ_G0012626	pseudogene	Chr4:43092907-43093229 (-)
AKR/J	MGP_AKRJ_G0012595	pseudogene	Chr4:44144354-44144676 (-)
BALB/cJ	MGP_BALBcJ_G0012611	pseudogene	Chr4:43197287-43197609 (-)
C3H/HeJ	MGP_C3HHeJ_G0012472	pseudogene	Chr4:44755398-44755720 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012930	pseudogene	Chr4:46376287-46376609 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011247	pseudogene	Chr4:40471825-40472148 (-)
CAST/EiJ	MGP_CASTEiJ_G0012227	pseudogene	Chr4:44302677-44302999 (-)
CBA/J	MGP_CBAJ_G0012452	pseudogene	Chr4:47858905-47859227 (-)
DBA/2J	MGP_DBA2J_G0012508	pseudogene	Chr4:42984950-42985272 (-)
FVB/NJ	MGP_FVBNJ_G0012509	pseudogene	Chr4:42233103-42233425 (-)
LP/J	MGP_LPJ_G0012577	pseudogene	Chr4:44781985-44782307 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012515	pseudogene	Chr4:50934899-50935221 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012931	pseudogene	Chr4:44364473-44364795 (-)
PWK/PhJ	MGP_PWKPhJ_G0012057	pseudogene	Chr4:43086009-43086336 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011871	pseudogene	Chr4:43866654-43866994 (-)
WSB/EiJ	MGP_WSBEiJ_G0012249	pseudogene	Chr4:44275144-44275466 (-)

Homology

• Gene Tree
  Gm12443
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082242 (Evidence)
• NCBI Gene
  100040643

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082242	Ensembl Gene Model | MGI Sequence Detail	323	C57BL/6J
transcript	ENSMUST00000122308	Ensembl | MGI Sequence Detail	323	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;