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Gm12979 Gene Detail
Summary
  • Symbol
    Gm12979
  • Name
    predicted gene 12979
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3651303
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:129385762-129403539 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 63.26 cM
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651303
lncRNA gene Chr4:129385762-129403539 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003963
antisense lncRNA gene Chr4:131415318-131433140 (-)
A/J MGP_AJ_G0003944
antisense lncRNA gene Chr4:126170583-126188569 (-)
AKR/J MGP_AKRJ_G0003921
antisense lncRNA gene Chr4:129676636-129694068 (-)
BALB/cJ MGP_BALBcJ_G0003930
antisense lncRNA gene Chr4:126765779-126785312 (-)
C3H/HeJ MGP_C3HHeJ_G0003877
antisense lncRNA gene Chr4:129741134-129758969 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004078
antisense lncRNA gene Chr4:136358597-136380222 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003565
antisense lncRNA gene Chr4:119301472-119319745 (-)
CAST/EiJ MGP_CASTEiJ_G0003840
antisense lncRNA gene Chr4:127914764-127938598 (-)
CBA/J MGP_CBAJ_G0003870
antisense lncRNA gene Chr4:139731204-139751141 (-)
DBA/2J MGP_DBA2J_G0003886
antisense lncRNA gene Chr4:126602667-126620198 (-)
FVB/NJ MGP_FVBNJ_G0003905
antisense lncRNA gene Chr4:125363546-125381479 (-)
LP/J MGP_LPJ_G0003966
antisense lncRNA gene Chr4:131692539-131711375 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003893
antisense lncRNA gene Chr4:144573016-144590766 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004073
antisense lncRNA gene Chr4:130054700-130072359 (-)
PWK/PhJ MGP_PWKPhJ_G0003794
antisense lncRNA gene Chr4:123197746-123216492 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003740
antisense lncRNA gene Chr4:125920167-125938494 (-)
WSB/EiJ MGP_WSBEiJ_G0003876
antisense lncRNA gene Chr4:130173685-130193836 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    36
  • Chemically induced (other)
    2
  • Gene trapped
    32
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Gm12979
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086336 Ensembl Gene Model | MGI Sequence Detail 17778 C57BL/6J ±  kb
transcript ENSMUST00000145488 Ensembl | MGI Sequence Detail 405 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 8
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/16/2021
MGI 6.17
The Jackson Laboratory