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Pramel30 Gene Detail
Summary
  • Symbol
    Pramel30
  • Name
    PRAME like 30
  • Synonyms
    Gm13128
  • Feature Type
    protein coding gene
  • IDs
    MGI:3651261
    NCBI Gene: 626995
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:144330249-144333465 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.98 cM
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651261
protein coding gene Chr4:144330249-144333465 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029080
protein coding gene Chr4:147293159-147296397 (-)
A/J MGP_AJ_G0029051
protein coding gene Chr4:141402946-141407092 (+)
AKR/J MGP_AKRJ_G0028998
protein coding gene Chr4:145361898-145365830 (+)
BALB/cJ MGP_BALBcJ_G0029069
protein coding gene Chr4:142019456-142022672 (+)
C3H/HeJ MGP_C3HHeJ_G0028784
protein coding gene Chr4:145806174-145809390 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0026767
protein coding gene Chr4:133926895-133930247 (+)
CAST/EiJ MGP_CASTEiJ_G0028205
protein coding gene Chr4:143902290-143905523 (+)
CBA/J MGP_CBAJ_G0028746
protein coding gene Chr4:157416624-157419840 (+)
DBA/2J MGP_DBA2J_G0028894
protein coding gene Chr4:141262422-141265650 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0028992
protein coding gene Chr4:147735804-147742362 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028892
protein coding gene Chr4:160991735-161016003 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029549
protein coding gene Chr4:145844723-145848372 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0027758
protein coding gene Chr4:141116996-141121623 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 626995 NCBI Gene Model | MGI Sequence Detail 3217 C57BL/6J ±  kb
transcript NM_001085541 RefSeq | MGI Sequence Detail 1745 Not Specified  
polypeptide NP_001079010 RefSeq | MGI Sequence Detail 475 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2021
MGI 6.16
The Jackson Laboratory